| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1995 |
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| Symbol | |
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| ID | 5051890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2066411 |
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| End bp | 2067232 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472169 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001156770 |
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| Protein GI | 145590173 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCCTC GTTCAAACAC CCCATCCGAG TATCCAAGAG CGGTTTTAGT GACCGGCGCT
GCTAAGCGCT TGGGTCGGGA AATCGCCTTG CAGTTTGCCC GCCAGGGTTG GGATGTAGCC
ATTCATTATG GGCGCTCTGA GCAGGAAGCT CAAAAAACAC TGACTGATAT TCAAGGTCTT
GGGGTCAAGG TAGCCTTGTT TCAGGCAGAC TTGGCCGACG AGGGGAATAT TGAAAAGTTA
TTTTCTGCTG TCACCCAAGA ATTTCCACAT TTGCATTGCC TAGTAAATAG CGCCTCGATC
TTCGAATACG ATCGCTCTAA TTCCGCTTCA CCTCTGACTG CAAAAATCCT GCAGTCCCAC
ATGCAAGTAA ACCTGACTGC ACCTATCTTA TTGTCACAAA AAATGTTTGA GTTTCAAAAG
GGTAGGACTG AGAAAAATCC GTCAGCAGAT AGTGGCCTTC CTTCTGTCAT TCAATTGCTT
GATCAAAAGC TGATCAACCT CAATCCTGAT TATTTGTCAT ATACCCTATC TAAGGCTGCG
CTTCTGACCT CGGTTGAATT GCTTGCGGTG GATTTTGCTC CGCACCTCAG GGTAGTTGGG
CTAGCACCCG GTATCTCTTT ACCATCAGGC GATCAAACAG ATGATGGTTT TTCTAAAGCG
CATCAAATGA CGCCGCTAGA AAAATCTTCG ACGCCGCAAG ATATTGCCAA AGCTGCAATA
TTTTTGGCTG ATGCTAATGC CATTACAGGT ACCACCTTAT ATGTCGACGG CGGACAACAT
TTACTTCCTT CATCACGTGA TGTGATGTTC AAGACAAATT AG
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| Protein sequence | MNPRSNTPSE YPRAVLVTGA AKRLGREIAL QFARQGWDVA IHYGRSEQEA QKTLTDIQGL
GVKVALFQAD LADEGNIEKL FSAVTQEFPH LHCLVNSASI FEYDRSNSAS PLTAKILQSH
MQVNLTAPIL LSQKMFEFQK GRTEKNPSAD SGLPSVIQLL DQKLINLNPD YLSYTLSKAA
LLTSVELLAV DFAPHLRVVG LAPGISLPSG DQTDDGFSKA HQMTPLEKSS TPQDIAKAAI
FLADANAITG TTLYVDGGQH LLPSSRDVMF KTN
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