Gene Pnuc_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1982 
Symbol 
ID5051969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2051690 
End bp2052775 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content48% 
IMG OID640472156 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001156757 
Protein GI145590160 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAA AAACACAATC CAGTACTGCG AGTGATATTC ATTATCCCTT AGGCGAGAGT 
TTGCCTGAGA TCGGCGCAAC CATAGAGGTG GCACCTGGAG TTCGCTGGCT TAGAATGCGT
CTGCCATTCG CTTTGGACCA TATTAATTTA TGGATGCTAC GTGACCAAAT TGATGGGGTA
AATGGCTGGA CCATTGTGGA TTGCGGCATT GCAAATGATG AAACTAGGGC TGCTTGGGAA
GCCATTTTTG CAACGCAATT AGACGGTATG CCAGTGCTCC GTGTGATTGT GACCCATATG
CATCCTGATC ATGTAGGCTT ATCGCAATGG CTTTGTGAAA AATGGAAGGT GCCATTATGG
ATTTCAATGA CGGACTACCT CACCGCTCAA TGGCTTAGCT GCAAAGAGGG CGGTGCTGCG
ATTGGTGCGC GCGCTGGTGG CGGTGGTTCA GCAGACCATT TTCAAAGGCA TGGTTTAACC
ACGCCAGAAG ATTTAGAAAA AATTCGGGCG CGCTCGAATT ACTACAGCAA TATGGTTCCC
GGAGTTCCAC GCCAATATCG CCGTATTCTT GATGGTGAGT TGATTGAGAT TGGCGGGCGA
ACATGGGAGG TCATCATGGG TTATGGCCAC GCCCCGGAAC ACGCTTCGCT TTTTTGCAAA
GAGTTAAATG TATTAATTTC TGGTGATATG TTATTGCCAC GCATCTCTAC TAACGTCAGT
GTTTATGATG CCGATCCTGA TGCAGACCCG CTAGGTTTGT ATTTGCAATC ACTCGACCGT
TACTTGCCGT TACCTGACGA TGCTTTGGTA TTGCCTTCCC ATGGCAAGCC TTTTACCGGC
ATGAAGCCGC GTATTGCCCA GTTAAAAGCC CATCATGATG AGCGTTTGGC AGAAGCGCTC
GGCGCATGTA AAAAACCGGC GCATGCTCGA GAGATAGTGC CGGTTTTATT TAAGCGTGAA
TTAGATATTC ATCAACTGAC TTTCGCCATG GGCGAAGCTA TTGCTCATCT GAATTACCTA
CTTCGTCAAG GAAAGTTGCG TCGCCAGCTT TGCGAGGACG GCGTGTTGCG GTTTTCCGTG
GTTTAG
 
Protein sequence
MNAKTQSSTA SDIHYPLGES LPEIGATIEV APGVRWLRMR LPFALDHINL WMLRDQIDGV 
NGWTIVDCGI ANDETRAAWE AIFATQLDGM PVLRVIVTHM HPDHVGLSQW LCEKWKVPLW
ISMTDYLTAQ WLSCKEGGAA IGARAGGGGS ADHFQRHGLT TPEDLEKIRA RSNYYSNMVP
GVPRQYRRIL DGELIEIGGR TWEVIMGYGH APEHASLFCK ELNVLISGDM LLPRISTNVS
VYDADPDADP LGLYLQSLDR YLPLPDDALV LPSHGKPFTG MKPRIAQLKA HHDERLAEAL
GACKKPAHAR EIVPVLFKRE LDIHQLTFAM GEAIAHLNYL LRQGKLRRQL CEDGVLRFSV
V