Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1982 |
Symbol | |
ID | 5051969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 2051690 |
End bp | 2052775 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640472156 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001156757 |
Protein GI | 145590160 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA AAACACAATC CAGTACTGCG AGTGATATTC ATTATCCCTT AGGCGAGAGT TTGCCTGAGA TCGGCGCAAC CATAGAGGTG GCACCTGGAG TTCGCTGGCT TAGAATGCGT CTGCCATTCG CTTTGGACCA TATTAATTTA TGGATGCTAC GTGACCAAAT TGATGGGGTA AATGGCTGGA CCATTGTGGA TTGCGGCATT GCAAATGATG AAACTAGGGC TGCTTGGGAA GCCATTTTTG CAACGCAATT AGACGGTATG CCAGTGCTCC GTGTGATTGT GACCCATATG CATCCTGATC ATGTAGGCTT ATCGCAATGG CTTTGTGAAA AATGGAAGGT GCCATTATGG ATTTCAATGA CGGACTACCT CACCGCTCAA TGGCTTAGCT GCAAAGAGGG CGGTGCTGCG ATTGGTGCGC GCGCTGGTGG CGGTGGTTCA GCAGACCATT TTCAAAGGCA TGGTTTAACC ACGCCAGAAG ATTTAGAAAA AATTCGGGCG CGCTCGAATT ACTACAGCAA TATGGTTCCC GGAGTTCCAC GCCAATATCG CCGTATTCTT GATGGTGAGT TGATTGAGAT TGGCGGGCGA ACATGGGAGG TCATCATGGG TTATGGCCAC GCCCCGGAAC ACGCTTCGCT TTTTTGCAAA GAGTTAAATG TATTAATTTC TGGTGATATG TTATTGCCAC GCATCTCTAC TAACGTCAGT GTTTATGATG CCGATCCTGA TGCAGACCCG CTAGGTTTGT ATTTGCAATC ACTCGACCGT TACTTGCCGT TACCTGACGA TGCTTTGGTA TTGCCTTCCC ATGGCAAGCC TTTTACCGGC ATGAAGCCGC GTATTGCCCA GTTAAAAGCC CATCATGATG AGCGTTTGGC AGAAGCGCTC GGCGCATGTA AAAAACCGGC GCATGCTCGA GAGATAGTGC CGGTTTTATT TAAGCGTGAA TTAGATATTC ATCAACTGAC TTTCGCCATG GGCGAAGCTA TTGCTCATCT GAATTACCTA CTTCGTCAAG GAAAGTTGCG TCGCCAGCTT TGCGAGGACG GCGTGTTGCG GTTTTCCGTG GTTTAG
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Protein sequence | MNAKTQSSTA SDIHYPLGES LPEIGATIEV APGVRWLRMR LPFALDHINL WMLRDQIDGV NGWTIVDCGI ANDETRAAWE AIFATQLDGM PVLRVIVTHM HPDHVGLSQW LCEKWKVPLW ISMTDYLTAQ WLSCKEGGAA IGARAGGGGS ADHFQRHGLT TPEDLEKIRA RSNYYSNMVP GVPRQYRRIL DGELIEIGGR TWEVIMGYGH APEHASLFCK ELNVLISGDM LLPRISTNVS VYDADPDADP LGLYLQSLDR YLPLPDDALV LPSHGKPFTG MKPRIAQLKA HHDERLAEAL GACKKPAHAR EIVPVLFKRE LDIHQLTFAM GEAIAHLNYL LRQGKLRRQL CEDGVLRFSV V
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