| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1973 |
|---|
| Symbol | |
|---|
| ID | 5053607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 2041955 |
|---|
| End bp | 2043250 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640472148 |
|---|
| Product | cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001156749 |
|---|
| Protein GI | 145590152 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTC CCGGACACAC CTTACTCTCG CGGCTCAACT TTTCAGGGCC AAAGAAATCA
ACACATTCAA CGAACCAAGT ACCCATTAGC GCACAAACTG TCTTAGGTAT CTTGTCTCAA
CTACGTAGTG GTCATTTAAC AATTACTTTA CCGAATGGCG AGGTAAATAA ATTTGGCAAT
ACAGCAGATG CTTTACACGC CGACATTCAA GTGTTGGACT GGTCATTCTT TAAGCAACTC
TTATCCCATG GAGATATTGG CTTTGCCGAA AGCTATATTC GCGGCGAATG GAATACTTCT
AACCTAAAAG CGATTCTGGA ATTAGCGATT CGTAATCGCA CCATTCTGGA GAAAGCAATC
TACGGAAGTT GGCTTGGATC GATTCTGTAT CGCCTTAAAC ATTGCCTACG TGATAACTCA
AAGGCAGGTA GCCGTAAGAA TATTCATGCA CATTACGATT TAGGTAACGC CTTTTATAGT
CTGTGGCTTG ATCCAACAAT GAGCTACTCC AGCGCATGGT TCTCAGATGG GGACAAGCAA
ACTTTGGCTG AAGCTCAACG CGCCAAAATT AAACGTATTC TTACCTCTCT TGATACCAAT
CCCGGTGACC ATATTTTAGA GATTGGTTGT GGCTGGGGCG GTGTAATGGA AGAAGCCCTA
CGTAACGAGA CTGCGATTAC TGGGCTTACT CTTTCAACCG AGCAAAAAGC TTATGCGGAA
AAAAGACTTG CCAATGTGTC TTCACAAACA TCCAATGCCA AACACTTCGA AGTACGTCTT
CAGGATTATC GAGATTGCCA AGAGCGGTTT GATGGAATTG CATCAGTAGA AATGTTTGAG
GCCGTTGGTG AAAAACATTG GCCTGAATAT TTTCAGACGA TTGCCAAATG CCTGAAGACT
GGCGGCAAAG CATGCGTACA AACCATTGTG ATTGCTGAAG AACTCTTCGA GCGCTATAGA
CACAATACTG ACTTTATTCA GCAATATGTA TTTCCAGGAG GCATGCTGCC CTCGCGCGCT
AGCTTTAAAG CAAGTGCCGC AAAGGCCGGG CTTCAGATTG AGAATGAATT TGCATTTGGG
GTGGACTATG CCAAAACCCT CTGCTTATGG CGAGATAGCT TTAATTCAAA AGTTCAAGAA
GTTCGTCAAC TAGGATTTGA CGAAGCCTTC ATTCGACTCT GGAATTTTTA TCTCATGTAT
TGCGCCGCAG GGTTTGCAGA GCGTAATATT GATGTGGTGC AGTTCACATT AAGCCATCAG
ACCAACACAG CATCTAGGGA TGCGATCAAA GCATGA
|
|---|
| Protein sequence | MNRPGHTLLS RLNFSGPKKS THSTNQVPIS AQTVLGILSQ LRSGHLTITL PNGEVNKFGN
TADALHADIQ VLDWSFFKQL LSHGDIGFAE SYIRGEWNTS NLKAILELAI RNRTILEKAI
YGSWLGSILY RLKHCLRDNS KAGSRKNIHA HYDLGNAFYS LWLDPTMSYS SAWFSDGDKQ
TLAEAQRAKI KRILTSLDTN PGDHILEIGC GWGGVMEEAL RNETAITGLT LSTEQKAYAE
KRLANVSSQT SNAKHFEVRL QDYRDCQERF DGIASVEMFE AVGEKHWPEY FQTIAKCLKT
GGKACVQTIV IAEELFERYR HNTDFIQQYV FPGGMLPSRA SFKASAAKAG LQIENEFAFG
VDYAKTLCLW RDSFNSKVQE VRQLGFDEAF IRLWNFYLMY CAAGFAERNI DVVQFTLSHQ
TNTASRDAIK A
|
|---|
| |