| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1969 |
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| Symbol | |
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| ID | 5053072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2038626 |
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| End bp | 2039114 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640472144 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_001156745 |
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| Protein GI | 145590148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTCTT TACTCCCACC CTCTTTTGAA ACAAAAGTGT GTTCCCAGGA GCAGCTTGTG
GAACGCATTG CTAAGCTACC AAGACCCCTT GTGTTTACTA ATGGGGTTTT CGATATCTTG
CATCGAGGTC ATGCCAGTTA TTTGGCTCAA GCACGTGCAC TTGGAGCAAG CTTGGTCGTC
GGAGTGAATT CAGATACATC AGTCAAGATG TTGGGTAAAG GCGATGATAG GCCTATTAAC
TCAGAGGCGG ATCGTCAAGC ACTATTGGCA GCCTTGGAAA GCGTTGATAT GGCTGTTTTA
TTTACAGAAC AAACTCCAGT CAATCTCATC GAAAAAATAC GCCCCGATAT TTACGTTAAG
GGCGGTGATT ATGAAATTGA CACATTGGCA GAAACCCATT TGGTGAAGAC CTGGGGTGGT
AAAGCGATTG CGATTCCATT TTTATATGAG CGATCTACAA CTACTTTGCT CGGCAAGATT
CGCTCTTGA
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| Protein sequence | MSSLLPPSFE TKVCSQEQLV ERIAKLPRPL VFTNGVFDIL HRGHASYLAQ ARALGASLVV
GVNSDTSVKM LGKGDDRPIN SEADRQALLA ALESVDMAVL FTEQTPVNLI EKIRPDIYVK
GGDYEIDTLA ETHLVKTWGG KAIAIPFLYE RSTTTLLGKI RS
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