| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1968 |
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| Symbol | |
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| ID | 5052047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2037805 |
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| End bp | 2038617 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640472143 |
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| Product | Baf family transcriptional activator |
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| Protein accession | YP_001156744 |
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| Protein GI | 145590147 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCTCT ATCTATTATT TGACGTTGGC AATACCCGTC TGAAATGGGC GGCTGTTGAA
TCTTCTCAAA AGCCATCTGA TCAACAAAAA AAGTTATGGG CTTACTCAGG CTCTATTAGC
AGCAAATCCC TGCAATCTCC GGAACACAAA GCCGAGCTAG CAGATTACAT CGCTAAAACA
TTACCGAAAC CAGATGCTAT TGGATTTAGC TGTGTAGCCG GGGCAGATGC CATTGATAAT
CTCAAATCCC TTTTTCCACA ATGGGGGGAT ATCGAGTGGA AACAATTACG CGGAGACAGT
AGTTATGAAG GGATACGCAC GTTATATCAA GACCCTAGTA AATTGGGGGC TGACCGTTTA
GCTGCTGTCA TTGGAGCGCG CGCACTTTCA AAGAGCAATA CTCTCATCAT CAATGCCGGC
ACCGCTACTA CGATTGATTT ACTGGGCTCG AATGGCCTGC ACTATGGCGG CTGGATCCTA
CCAGGCTTAG GACTCATGCA AAAAAGCTTG GAAGCCAATA CAGCGCAATT ACCGCTAGCG
GTTCGTGGGG ATGCACCACT AGGCTTTGGG CGTTCCACAA ATGATGCCAT TATTGGTGGA
TGTGATGCCG CTCAACTTGG CGCCATTCAA TTTGCAATTG ATGTTGCTAA AGATCTGAAT
CATCCAGTCG AAAGAATTTG GCTTGATGGT GGAAACTCTA AAGTGATTGC AAGCGAAATA
AACCGCTTGG GGAAACTCAA GTCGCTCACG ATTGAGCCCT CAGAAGGATT GGTGCTAAGA
GGTCTCTGGG CGTGGCTTCT GAATAATCCC TAA
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| Protein sequence | MSLYLLFDVG NTRLKWAAVE SSQKPSDQQK KLWAYSGSIS SKSLQSPEHK AELADYIAKT
LPKPDAIGFS CVAGADAIDN LKSLFPQWGD IEWKQLRGDS SYEGIRTLYQ DPSKLGADRL
AAVIGARALS KSNTLIINAG TATTIDLLGS NGLHYGGWIL PGLGLMQKSL EANTAQLPLA
VRGDAPLGFG RSTNDAIIGG CDAAQLGAIQ FAIDVAKDLN HPVERIWLDG GNSKVIASEI
NRLGKLKSLT IEPSEGLVLR GLWAWLLNNP
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