Gene Pnuc_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1960 
Symbol 
ID5052741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2032297 
End bp2032878 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content37% 
IMG OID640472135 
Producthypothetical protein 
Protein accessionYP_001156736 
Protein GI145590139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTAAAA ATGTTTTAAG AATTGGTTGT TTTGCGACAC TTGTTTTTTT ACTAGCCTGT 
AGTCCAAAAC TTAACTGGCG CAATGTCCAA GCTCCAGACC AACACTACAC CGCGCTCTTT 
CCTGGTAAAC CAGAAAAGAT GGAGCGTCAA CTTCCTTATC AAAATCAAGA GCTCAAGCAA 
TCGCTTGAGG CTATCAAAAT TGATGATGAT ATTTATTCAA TTAGCACCAT CAAGCTGCCC 
GCAAATACAG CCTGGGAAGC CTCAAAAATA GTCTTCCAGT TGCAGAGCAA TTTGCTTGAT 
AGAGCAAAGG CCTCAGGGGG TATTGCTAAT GTTGAAGAGA CCACATATCA AACAGTTGAT 
CATCAGAAAT TCGCTAGTAA AGATTATTTC ATTACATTTA AAGCGAATGA AAAAATCCAG 
CAAATGATGC GAGTTCGTTG GATTACTCGA TTTTCTGGAA ATGGTGATGT ATGGATTTAT 
CAGATATCAG TGCTGCATAC CAATCCAAAT TCGGACGATT CAAAAATACT TTTATCTAAA 
GAAGAATACG AAACTTTCTT TAATGAGTTT TATCCAGATT AA
 
Protein sequence
MFKNVLRIGC FATLVFLLAC SPKLNWRNVQ APDQHYTALF PGKPEKMERQ LPYQNQELKQ 
SLEAIKIDDD IYSISTIKLP ANTAWEASKI VFQLQSNLLD RAKASGGIAN VEETTYQTVD 
HQKFASKDYF ITFKANEKIQ QMMRVRWITR FSGNGDVWIY QISVLHTNPN SDDSKILLSK 
EEYETFFNEF YPD