Gene Pnuc_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1950 
Symbol 
ID5052865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2023459 
End bp2024211 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content46% 
IMG OID640472125 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001156726 
Protein GI145590129 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATG AGCAGCTGCT TCGTTACTCA AGACATCTCC TCCTTGAGGA TATTGATGTT 
GAGGGTCAAG AGAAGCTTCT TAATTCGCAC GCGCTAGTCA TTGGTGCTGG CGGTCTAGGC
TGTGCTGCAG CACCCTATCT AGCTGCAGCT GGCCTTGGAC ATATCACCCT CATTGATCAT
GATGAGGTAG AGATAACCAA TCTTCAGCGC CAAATAATGC ATACAGAAAG TAGCATTGGA
AAAAGTAAGG TGGATTCTGG GAAACACTTT CTTTGCCAAC TCAATTCTGG TGTTCGCATT
CAAACAGTTC AAGCCAAAGT CACTAAGTCG ATATTGGATG ACTTATTACC AAGCGTAGAC
ATTGTTTTAG ATTGCACTGA TAACTTTCAA ACACGACACC TCATCAATGC AAGCTGCGTG
CAATATCAAA TCCCTCTAGT TTCAGGATCA GCCTTACGTT TTGATGGTCA AATAACCGTC
TTTGATCTGC GAAACACAGC TTCACCTTGC TATGCCTGTA TCTTCTCTCC CGATGAAACA
TTCGAAGAAG TGAGCTGCTC TAGTATGGGA ATCTTTTCAC CACTCGTAGG CATCATTGGC
TCGATTCAAG CCGCTCAAGC CCTGCAAGTT CTGATTGGGT TTGGAGAGCC TTTAGTAGGC
CGGATGCTGC TCTGGAATGC CCGGGCCACC AATATTGATG AGATTCGGAT TGCGCGCAAC
ACTGAATGCT CAGTATGCGG CAAAGCCCAT TAA
 
Protein sequence
MNDEQLLRYS RHLLLEDIDV EGQEKLLNSH ALVIGAGGLG CAAAPYLAAA GLGHITLIDH 
DEVEITNLQR QIMHTESSIG KSKVDSGKHF LCQLNSGVRI QTVQAKVTKS ILDDLLPSVD
IVLDCTDNFQ TRHLINASCV QYQIPLVSGS ALRFDGQITV FDLRNTASPC YACIFSPDET
FEEVSCSSMG IFSPLVGIIG SIQAAQALQV LIGFGEPLVG RMLLWNARAT NIDEIRIARN
TECSVCGKAH