| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1949 |
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| Symbol | |
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| ID | 5052178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2021999 |
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| End bp | 2023432 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640472124 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001156725 |
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| Protein GI | 145590128 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAAT TTCTCAAGAA GTTTGCCCTC ATTACTATTG GCCTTATTGC TGGTGTGACA
GCCACCATAC AGCTTTCAGC TACCGCCCAA CAAGGTACTC AGTTGCCGCT AGACGAAGCT
CGCACCTTAG CAAATGTCCT CAGTTACATT CAAAAAGAAT ATGTCGAGCC GGTTGACGAT
AAGAAACTAC TCACCGAAGC CACCAAAGGT ATGGTGAGCA GCTTGGATCC ACACTCCACC
TTCTTGGATA AAAAAGATTT TGCTGAGATG CAAGAGATGA CATCCGGAAA GTTTGCTGGT
CTAGGAATTG AAATTACTTC AGAAGATGGT GTAGTTAAAG TTTTGAATCC TATTGAAGAT
AGCCCTGCTG CACGCGCCGG ATTGCAAGCA GGCGACTTAA TCACCCGCCT TGATGACAAA
CCTGTTCGCG GCATGTCTTT GGATAAAGCA GTTCGTACAA TGCGTGGTGA ACCAGGAACA
AAAATTACCC TTACGGTATA TCGTAAAAGT GAAGAGCGTA GTTTTCCTGT CACGATTACC
CGTGCAGAAA TTAAAGTGCA ATCTGTTAAG ACCAAAATTT TAGACAACGA TATTGCTTGG
GTGCGTATTA CCAGCTTTCA AGAACGCACT GTTCCAGACC TTGCTAAAAA ATTAACTGAA
ATTGCTAAGC AAGATCCAAA GCTCAAGGGC GTTATTTTAG ATCTCCGTAA CAACGGTGGT
GGCCTGCTAC AAGGCGCAGT TGGCGTTGCA GCAGCCTTTT TGCCGGCAGA TGCGGTTATC
GTATCAACTA AAGGTCAATC AGCAGATTCT AAGCAGGTGT TTAATGCCAC TCCTGCCATG
TATCGTCTTG GTGAAGCGGG TGATCCACTC GCTGGCGTGC CTGAAATGTT TAAAAAGATA
CCGATGGTCG TTCTAGTCAA TGCATACTCA GCATCTGCTT CTGAGATTGT TGCTGGCGCA
TTACAAGATT ACAAACGCGC AACCATTATT GGCAAAACTA CTTTTGGTAA AGGCTCGGTA
CAAACGGTAC GCCCATTAAC CAGTGATTCA GCACTAAAAA TTACTACCGC CTATTACTAC
ACACCAAGCG GCAAATCGAT TCAAGCCTAT GGAATTAAGC CAGATATCCC AGTTGACCAA
AATAAAGATG GTGATCCCGA TGATGTCTTA ATCACCCGTG AAATTGATAG TGAAAAGCAT
TTGCGCAATA AACAATCTGC AGAAGATAAG TTAATTGCTG ATCGTGAAAA ACGTCGTCTT
GAAGAGCTTC AACGCATTGA AGAGAAAAAT GCGAAGAAAA CTCCTGAAGA AAAAGAGAAA
GAGAAAAACA AGAAGCCAAC AGAACTGGGT AGCGCTGATG ATTTCATGCT TACCCAGGCT
GTCGCTTATA TCAATGGTCA GCCAGTAAAA CGCTCTTCAT CTAAGCTTGA GTAA
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| Protein sequence | MRQFLKKFAL ITIGLIAGVT ATIQLSATAQ QGTQLPLDEA RTLANVLSYI QKEYVEPVDD
KKLLTEATKG MVSSLDPHST FLDKKDFAEM QEMTSGKFAG LGIEITSEDG VVKVLNPIED
SPAARAGLQA GDLITRLDDK PVRGMSLDKA VRTMRGEPGT KITLTVYRKS EERSFPVTIT
RAEIKVQSVK TKILDNDIAW VRITSFQERT VPDLAKKLTE IAKQDPKLKG VILDLRNNGG
GLLQGAVGVA AAFLPADAVI VSTKGQSADS KQVFNATPAM YRLGEAGDPL AGVPEMFKKI
PMVVLVNAYS ASASEIVAGA LQDYKRATII GKTTFGKGSV QTVRPLTSDS ALKITTAYYY
TPSGKSIQAY GIKPDIPVDQ NKDGDPDDVL ITREIDSEKH LRNKQSAEDK LIADREKRRL
EELQRIEEKN AKKTPEEKEK EKNKKPTELG SADDFMLTQA VAYINGQPVK RSSSKLE
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