Gene Pnuc_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1947 
Symbol 
ID5052093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2020860 
End bp2021273 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID640472122 
Productrhodanese domain-containing protein 
Protein accessionYP_001156723 
Protein GI145590126 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTC TCACTCAAAT TGATAATTTA GCGCTTATTG CCTTACTAGT GGTTTCCGGC 
ATAGCGCTCT TCCTGCCTAC ATTATCTACG CTTATTCGCG GAAAAGGCTT AACAGCAACT
GAAGCCACTA TTTGGATAAA TCGTCGCAAA GCCTATGTTT TGGATTTACG TCCAGAAGAG
GCTTTTAAGG TGGGCCATTT GCCCGGGGCG AAATTGGCTA ATGCATCCGC GATTGCGGCT
GCAATTGAGG CATTGAAATT GGATCGTAAG CGCCCTGTAG TTTTGGTCTG TGAAACTGGT
GCCCAGTCTC GCAAAGCGCT TTCTGAGGTA CAAAAACTGG GTTTTCTGGA AGTTGGCGCC
TTAGATGGTG GCGTGCAGGC TTGGAAGCTG GCTGCCCTCC CTTTGGTTAA GTGA
 
Protein sequence
MNFLTQIDNL ALIALLVVSG IALFLPTLST LIRGKGLTAT EATIWINRRK AYVLDLRPEE 
AFKVGHLPGA KLANASAIAA AIEALKLDRK RPVVLVCETG AQSRKALSEV QKLGFLEVGA
LDGGVQAWKL AALPLVK