Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1947 |
Symbol | |
ID | 5052093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 2020860 |
End bp | 2021273 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640472122 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001156723 |
Protein GI | 145590126 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTC TCACTCAAAT TGATAATTTA GCGCTTATTG CCTTACTAGT GGTTTCCGGC ATAGCGCTCT TCCTGCCTAC ATTATCTACG CTTATTCGCG GAAAAGGCTT AACAGCAACT GAAGCCACTA TTTGGATAAA TCGTCGCAAA GCCTATGTTT TGGATTTACG TCCAGAAGAG GCTTTTAAGG TGGGCCATTT GCCCGGGGCG AAATTGGCTA ATGCATCCGC GATTGCGGCT GCAATTGAGG CATTGAAATT GGATCGTAAG CGCCCTGTAG TTTTGGTCTG TGAAACTGGT GCCCAGTCTC GCAAAGCGCT TTCTGAGGTA CAAAAACTGG GTTTTCTGGA AGTTGGCGCC TTAGATGGTG GCGTGCAGGC TTGGAAGCTG GCTGCCCTCC CTTTGGTTAA GTGA
|
Protein sequence | MNFLTQIDNL ALIALLVVSG IALFLPTLST LIRGKGLTAT EATIWINRRK AYVLDLRPEE AFKVGHLPGA KLANASAIAA AIEALKLDRK RPVVLVCETG AQSRKALSEV QKLGFLEVGA LDGGVQAWKL AALPLVK
|
| |