| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1939 |
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| Symbol | |
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| ID | 5053716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2013920 |
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| End bp | 2015551 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472114 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001156715 |
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| Protein GI | 145590118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0346979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG TCTCTACTAC CCACGATCAC GATCACACAC ACGCACACGA TCACGCGCAT
GATGATCACA CGCCACATGG TTGGCGTCGT TGGTTGTTCG CAACCAACCA TAAAGACATC
GGCACGATGT ATTTGATCTT CTCGTTTATT AGTTTGTTGG CTGGCGGAAC GATGGCCCTG
GGAATCCGTT TGGAATTGTT CCAGCCAGGT TTGCAATTTT TCCGTCCAGA GTTTTTTAAC
CAATTAACTA CCATGCATGG TTTGGTAATG GTGTTTGGCG CGATCATGCC AGCATTCGTT
GGCTTTGCTA ACTGGATGGT GCCTTTGCAA ATCGGTGCGT CCGATATGGC ATTTGCGCGT
ATGAATAACT TTAGTTTCTG GATCTTGCCG GTAGCAGCTA CTTTATTGCT TAGTTCATTC
TTAGCTCCTG GCGGCGCTCC ATCAGGCGGT TGGACTATCT ACGCTCCATT GACCTCACAA
ATGGGCCCTG GCTTGGATAT GGGTATTTTT GCACTCCATT TGTTAGGCGC TTCTTCCATC
ATGGGTTCAA TCAATATCAT TGTGACCATC TTAAACATGC GCGCTCCTGG CATGACTTTG
ATGAAGATGC CAATGTTCTG CTGGACTTGG TTGATTACAG CTTACTTATT GATTGCAGTG
ATGCCTGTTT TGGCCGGTGC AATTACGATG GTTCTAACTG ATCGTCACTT CGGCACTTCA
TTCTTCTCTG CTGTTGGTGG TGGCGACCCA ATCATGTTCC AGCATATTTT CTGGTTCTTT
GGTCACCCAG AGGTTTACAT CATGATTCTT CCTGCGTTCG GAATCATCAG TGAAATCGTG
CCAGCATTCT CCAGAAAAAC ATTGTTTGGC TACAGCTCTA TGGTTTATGC AACATCGTCT
ATTGCGATTT TGTCATTCAT CGTATGGGCA CACCACATGT TTGCAACAGG TATGCCAGTT
ACTGGTCAAC TGTTCTTCAT GTACGCAACA ATGTTGATTG CTGTTCCAAC TGGCGTGAAG
ATTTTTAACT GGGTAGCAAC AATGTGGCAA GGTTCAATGA CCTTTGAAAC ACCAATGTTG
TGGGCCGTTG GTTTTATTTT CGTATTTACT ATGGGCGGCT TTACTGGTTT GATCCTAGCA
ATGGCGCCGA TTGATATTGG CTTGCAGGAT ACCTATTACG TAGTAGCCCA CTTTCACTAT
GTGCTGGTTG CCGGCTCTTT GTTTGCAATG TTTGCTGGCT TCTACTACTG GTGTCCAAAG
TGGACTGGCT ACATGGCAAA TGAAACACGT GGCAAGATCC ATTTCTGGGC TTCGATGATT
TTCTTTAACA TCACCTTCTT CCCAATGCAC TTCTTGGGTC TTGCAGGTAT GCCACGTCGT
TACGCAGACT ACCCAACTCA GTTTGCTGAC TTCAACGCTA TTGCATCCAT TGGCGCCTTA
GGTTTTGGTT TGTCGCAGGT GTATTTCTTG ATATTTGTTG TGTTGCCAGC GTATCGTGGT
CAAGGTGAAA AAGCACCTGC AAAACCATGG GATGGCGCAA AAGGTTTGGA GTGGACTATT
CCATCGCCAG CACCTCATCA CACATTCGAA ACTCCACCAA GTGCAGAGCA GTTGCGTGAA
GCAGGAATTT AA
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| Protein sequence | MSTVSTTHDH DHTHAHDHAH DDHTPHGWRR WLFATNHKDI GTMYLIFSFI SLLAGGTMAL
GIRLELFQPG LQFFRPEFFN QLTTMHGLVM VFGAIMPAFV GFANWMVPLQ IGASDMAFAR
MNNFSFWILP VAATLLLSSF LAPGGAPSGG WTIYAPLTSQ MGPGLDMGIF ALHLLGASSI
MGSINIIVTI LNMRAPGMTL MKMPMFCWTW LITAYLLIAV MPVLAGAITM VLTDRHFGTS
FFSAVGGGDP IMFQHIFWFF GHPEVYIMIL PAFGIISEIV PAFSRKTLFG YSSMVYATSS
IAILSFIVWA HHMFATGMPV TGQLFFMYAT MLIAVPTGVK IFNWVATMWQ GSMTFETPML
WAVGFIFVFT MGGFTGLILA MAPIDIGLQD TYYVVAHFHY VLVAGSLFAM FAGFYYWCPK
WTGYMANETR GKIHFWASMI FFNITFFPMH FLGLAGMPRR YADYPTQFAD FNAIASIGAL
GFGLSQVYFL IFVVLPAYRG QGEKAPAKPW DGAKGLEWTI PSPAPHHTFE TPPSAEQLRE
AGI
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