| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1938 |
|---|
| Symbol | |
|---|
| ID | 5053813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 2013211 |
|---|
| End bp | 2013792 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640472113 |
|---|
| Product | cytochrome c oxidase assembly protein CtaG/Cox11 |
|---|
| Protein accession | YP_001156714 |
|---|
| Protein GI | 145590117 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3175] Cytochrome oxidase assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.233238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTC TTCATTCCAA TAACCGTCAA ATCATGCTCA AACTGCTCAT TGCAGCAGTC
ATGATGTTTG GTTTTGGCTA TGCATTAGTC CCCATGTACC AAGCCTTATG TAAGGTTACT
GGCATCAATG TGCTTACTAG CAAGAATGAT TATGGTGTCA GGGCAATAAG TCCCAATAGA
ATTGGCAATA CTCAAGTCGA TTATTCACGT AAAGTGACTA TCGAATTTGA TTCAAACAGC
CGAGGCCCTT TTACATTCAA GCCAGTAAAA AACTTTTTAG AAGTGCACCC TGGCGAGATG
ACTGAGATTG TGTACGAGGT TACGAATAAT TTAGGTCGTA CGGTAGAAGC GCAAGCTATC
CCTAGTTATG CGCCAAAGAG TGCAACTGAA TTCTTTACCA AGTTAGAGTG CTTCTGTTTT
CAACAGCAGA CTTTGGCGCC TTATGAAATG AAGAGGATGC CAGTGGTTTT TGTGATTGAT
GCAGGTTTAC CTGAGGATGT AAAAACCATT ACCTTGTCGT ATACCTTCTT TGAGATAGGT
GTAGGTCAGC AACCTGCTGG CTCAACCACT CCTAAAACTT AG
|
|---|
| Protein sequence | MTTLHSNNRQ IMLKLLIAAV MMFGFGYALV PMYQALCKVT GINVLTSKND YGVRAISPNR
IGNTQVDYSR KVTIEFDSNS RGPFTFKPVK NFLEVHPGEM TEIVYEVTNN LGRTVEAQAI
PSYAPKSATE FFTKLECFCF QQQTLAPYEM KRMPVVFVID AGLPEDVKTI TLSYTFFEIG
VGQQPAGSTT PKT
|
|---|
| |