Gene Pnuc_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1934 
Symbol 
ID5053272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2011047 
End bp2011769 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content50% 
IMG OID640472109 
ProductSURF1 family protein 
Protein accessionYP_001156710 
Protein GI145590113 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTGA TTGGCTGTGC TGCTGGGGTA TGGCAGTTAA ATAGGGCTGA AACCAAAATT 
GCTTTGGCCG CTAACTTACT AGCACGCCAA CAAATGCCCA TCTTGAGTGC GAATACGCAA 
TTCTGGAGTT TGGAGGAGGT ACATGAACGT CGTATGACGG CCCGTGGTCA CTACCTTCCT 
CATTCTGCAA TTTGGCTTGA TAACCGTCCA AGACCGATTC CTGCAGGCGG GGAAGGCAAC 
ACTGCCCAAG CAGGGTTTTA TTTGTTAATG CCCTTTCAAT TAGAAGGCAG GGATGAGGTG 
CTTTGGATCA ACCGGGGTTG GGCACCTCGC AATAATGATC GGCGAGAGAC GTTGCCGCCC 
ATTAGCACCC CTCTCAATGT CATTTCTGTG GAAGGCATTG TCTTTGCCCA CCCTGGAAAG 
GTTTATGAGC TCGGCGCAGA CAGTAAAGTG CTTGATCCCA ACCAGTCTCG GATAGCCCAA 
AATTTTGATT TAGAACGCGA AGCAAAGTTG CATGGATGGT TGCAGGCGCC TTTTATCTTG 
CGTCAGGAGG AGTCTGGAGC TCAGGATGGC CTACTGCGAG AATGGGCGCC CCTGACAACC 
GGAGTCAATC GCCATTATGC TTATGCATTC CAGTGGTTCG CTTTAGCGTT TTCTGGCTTC 
TTATTTTGGC TGATTAGTGG TCTGCGTCAA TACTGGCGCC GTGATGTTGT GAATGGGGAT 
TAA
 
Protein sequence
MIVIGCAAGV WQLNRAETKI ALAANLLARQ QMPILSANTQ FWSLEEVHER RMTARGHYLP 
HSAIWLDNRP RPIPAGGEGN TAQAGFYLLM PFQLEGRDEV LWINRGWAPR NNDRRETLPP 
ISTPLNVISV EGIVFAHPGK VYELGADSKV LDPNQSRIAQ NFDLEREAKL HGWLQAPFIL 
RQEESGAQDG LLREWAPLTT GVNRHYAYAF QWFALAFSGF LFWLISGLRQ YWRRDVVNGD