| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1929 |
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| Symbol | |
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| ID | 5052853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2006825 |
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| End bp | 2007754 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640472104 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001156705 |
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| Protein GI | 145590108 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACAAA AGAAATTCGA CAAACCGACT ATGCAAAGGC TGCCTGTAGC GCAGGCTGCG
ACGGCGTCTG CATTTCCAAT GTTGCCGACT CTTGGGGTTG GCACTCTCGA CTCATACATT
GCATACGTTA ATCGCGTACC AATGCTCAGC GCTGCGGAAG AATTACATCT TGCGCAGGAG
TTTCGTCGCA CTGAAAATGT AGATGCAGCG AAGACATTGG TGCTTTCGCA TCTCCGTCTC
GTTGTTTCAG TTGCGCGTCA ATATCTTGGC TATGGCATTC CTCATGCCGA CTTAATTCAA
GAAGGCAATA TCGGCCTAAT GAAAGCAGTC AAACGCTACG ACCCAAATAA TGGTGCACGA
CTTGTTTCTT ACGCGATTCA TTGGATCAAA GCAGAAATTC ATGAGTACAT TCTCAAAAAT
TGGCGCCTAG TAAAGACAGC AACCACCAAA GCACAACGCA AATTGTTCTT TAACTTACGT
AGCAATAAGC CAACCTTGAG CGCACTTACT CCTAGCGAGG TAGATGCACT AGCTAAGGCA
TTGGATGTCA AAGGCTCGGA TGTTAAAGAA ATGGAAATGC GGCTTGCTGG TGGAGACATT
GCATTAGAGG GCGATGACAG CGATGATGAA TCCGCGTATG CGCCCATTCA ATGGCTAGCT
GATAACACTC AAGAGCCCAC AGCGCGCATT GCCAGCGCAG AGGCGGATGC TCTACAAGGC
CCTAGATTGG ATCAAGCCTT GATGTCTCTA GACGAGCGTA GTCGCAACAT TGTGCAATCT
CGCTGGTTAG CCATGGATGC TGAAGGTAAC GGAACAAAAA CACTTCATGA TTTAGCCGCA
GAATATGGCA TTTCAGCAGA ACGTGTGCGC CAAATTGAGA CAGCCGCTCT TAAAAAGATG
CGCGGCCTCT TAGAAGCTCA GGCAGCTTAA
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| Protein sequence | MVQKKFDKPT MQRLPVAQAA TASAFPMLPT LGVGTLDSYI AYVNRVPMLS AAEELHLAQE
FRRTENVDAA KTLVLSHLRL VVSVARQYLG YGIPHADLIQ EGNIGLMKAV KRYDPNNGAR
LVSYAIHWIK AEIHEYILKN WRLVKTATTK AQRKLFFNLR SNKPTLSALT PSEVDALAKA
LDVKGSDVKE MEMRLAGGDI ALEGDDSDDE SAYAPIQWLA DNTQEPTARI ASAEADALQG
PRLDQALMSL DERSRNIVQS RWLAMDAEGN GTKTLHDLAA EYGISAERVR QIETAALKKM
RGLLEAQAA
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