Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1920 |
Symbol | |
ID | 5052595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1999222 |
End bp | 2000187 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640472095 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_001156696 |
Protein GI | 145590099 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCCA CAAACGCAGA TTTATTGACT TTATTTACAG GCAACGCAAA TCCGGTTTTG GCTGAGGCAG TAGCCAAAGA GCTCAAGCTC CCTATGGGAA AAGCCTTTGT AGGACGTTTC TCAGACGGTG AAATCCAAGT AGAAATTCAA GAAAACGTTC GCGGCAAAAA CGTGGTGGTC ATTCAATCGA CCTGTGCTCC AACAAATGAC AGTTTGATGG AGCTCATGAT CATGATTGAT GCCCTCAAGC GCGCTTCTGC AAGCCGCATC ACCGCAGTGA TTCCTTACTT TGGCTATGCT CGTCAAGATC GTCGTCCCCG CTCAGCTCGT GTGGCTATCT CCGCTCGCAT CGTAGCCAAT ATGCTTCAAT CGGTTGCCGG CATTGAGCGT GTTTTGACCA TGGATCTTCA TGCCGACCAA ATTCAGGGCT TTTTTGATAT CCCGGTAGAT AACATCTATG CGTCTCCAGT GCTGTTGGCT GATCTACAGG CACAGAAGAC CCAAAAAGAC CTCATCATCG TCTCTCCCGA CATTGGGGGC GTAGTACGTG CCCGTGCCAT GGCAAAGCAA TTAGGCACTG ATTTAGCGAT TATTGATAAA CGTCGCCCTA AAGCCAACGT CTCCGAAGTG ATGCACTTAA TCGGCGAAGT AGAAGGCCGC CATTGCGTGA TCATGGATGA CATCATCGAT ACTGGCGGCA CCCTCTGTAA GGCTGCTGAA GCCCTTAAAG AGCGTGGCGC TAAGGGTGTT ACTGCCTATT GCACCCATGC CGTTCTATCA GGCGGTGCAG TGGCCAGAAT TGCAGCGTCT GAATTGGATG AATTAGTGGT TACAGACACT ATTCCCCTCA CCCCAGAAGC GATGAAAGTC ACCAAAATTC GTCAATTGAC TGTTGCCCCA CTGCTTGCCG AGACTCTTTC TCGCATTAGC AAAGGTGATT CAGTCATGTC CATGTTTGCC GAATAA
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Protein sequence | MSSTNADLLT LFTGNANPVL AEAVAKELKL PMGKAFVGRF SDGEIQVEIQ ENVRGKNVVV IQSTCAPTND SLMELMIMID ALKRASASRI TAVIPYFGYA RQDRRPRSAR VAISARIVAN MLQSVAGIER VLTMDLHADQ IQGFFDIPVD NIYASPVLLA DLQAQKTQKD LIIVSPDIGG VVRARAMAKQ LGTDLAIIDK RRPKANVSEV MHLIGEVEGR HCVIMDDIID TGGTLCKAAE ALKERGAKGV TAYCTHAVLS GGAVARIAAS ELDELVVTDT IPLTPEAMKV TKIRQLTVAP LLAETLSRIS KGDSVMSMFA E
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