| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1918 |
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| Symbol | |
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| ID | 5053108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1996724 |
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| End bp | 1998208 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640472092 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_001156694 |
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| Protein GI | 145590097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAT TCATACTAAA ACCCATATTA AAGGGCCTAT TCCTGGCGGC ACTTGGTAGC
ACATTTCTTT CTAGTCATGC AAATGCGCAG ACTGATGAGA TGCAATCCGG GCAAGCCGTA
TTTGAAGTCA TTGCCTCCGA ACTGGCTTTG CAGCATGGTG AGGCAGGCCT TGCTTATGGC
ACTTATATGG AGATGGCCCG TCAATATAGA GATCCTCGAC TTGCCCAAAG AGCGATGGAA
ATTGGAATTG CCGGCGGATC CCCAAATTTA GCGCTGCAAG CCGCACAACT CTGGGATGCG
CTTTCGCCCC CCTCAGAGAT CAAACCCAAA GAGGTGTTTG TCACGCTACT AGTTTTAAGT
AATCGTTGGC CTGATGCAGT GAAGCCTGCT ATTGAACTGC TTCGTAAGGA GACCCCTGCA
CAACAAGAAG CTACTTTGCT TCAATTGCAA ACCTTGTTGA GCAAAGCCAA AGATGAGACA
GAGGCCATGC GAGCTTTTTA TGAAATCGCC TCGGCCGCTA AGCCCATGCC TAAAAACCCA
GCGCTTCTTT ATACCTATGC GATGTCTGCC GAAAAAATGG GTCGGATAGA TGTGATGGAA
AAAACCTTAC GTGAGATATT GCGCACTAAT CCGAACGATC CCAATACCTT AAATGCCCTC
GGTTACTCTC TCGCTGATCG CAATCAGAAT TTACCAGAGG CATTTGCACT CATTAGCAAA
GCGCATCAAC TATCGCCAAA GGATGGTTTC ATTCTAGATA GTCTGGGCTG GGTTAATTTT
CGATTGGGAA AAAATACTCT TGCTCTAGAA CAATTACAGC AGGCCTATGA GATAAAACCT
GAAGCAGATA TTGCTGCGCA TATTGGTGAA GTACTATGGA CCATGAATCG CAAAGCAGAA
GCTGAAGCAA TATGGCGTCA AGGGCAACAG TTAGATGCGA ATAATCCAGT TTTATTGGAA
ACATTAAAAC GTCTTAAGCC TGACTGGACC AATACAGATC AAGCTCAAAA TGGCTCTTGG
GATGGGCGTT TTGCAGTTAA GGTAACCGGC CTGATTGAAA GTCAAAATCA AGGTGGATCG
GGTGGTTTTA CTTTGATACA AGAAGATCTA AAAGATACTC TTGAAATACG CAACCCAGTT
GGCGGATCAG TTGCAAAAAT TATCATCACA CCAGGAGAGG CAAGCCTTGA ACGTGATGGT
CAAGTCGTTA CCGCAATCGA TGCAGATACC TTAGTTCAAA ATACTCTTGG TCTACCGCTG
CCGGCGCGCG GATTGTCAAA TTGGTTAAAA GGTCAAGTAC GTGCTGGTAG TGAAGCGAGC
GTTGAAAGAA ATGCCAATGG ACAAGTCAGC AAAATTACTC AAGATGGTTG GAGCTTGATC
TACACCTGGA ACAATAAAAA CCAGTTAGAA AAACTGGTGA TGAACCGTAG CTCAAATATT
GGATCTATAG ATATTCGTCT TGTCTTTGAT CAAACCAATG AGTAA
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| Protein sequence | MSKFILKPIL KGLFLAALGS TFLSSHANAQ TDEMQSGQAV FEVIASELAL QHGEAGLAYG
TYMEMARQYR DPRLAQRAME IGIAGGSPNL ALQAAQLWDA LSPPSEIKPK EVFVTLLVLS
NRWPDAVKPA IELLRKETPA QQEATLLQLQ TLLSKAKDET EAMRAFYEIA SAAKPMPKNP
ALLYTYAMSA EKMGRIDVME KTLREILRTN PNDPNTLNAL GYSLADRNQN LPEAFALISK
AHQLSPKDGF ILDSLGWVNF RLGKNTLALE QLQQAYEIKP EADIAAHIGE VLWTMNRKAE
AEAIWRQGQQ LDANNPVLLE TLKRLKPDWT NTDQAQNGSW DGRFAVKVTG LIESQNQGGS
GGFTLIQEDL KDTLEIRNPV GGSVAKIIIT PGEASLERDG QVVTAIDADT LVQNTLGLPL
PARGLSNWLK GQVRAGSEAS VERNANGQVS KITQDGWSLI YTWNNKNQLE KLVMNRSSNI
GSIDIRLVFD QTNE
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