| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1917 |
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| Symbol | |
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| ID | 5053668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1995852 |
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| End bp | 1996688 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640472091 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001156693 |
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| Protein GI | 145590096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAC TTCCAGAAGT AGAAGTCACT AAATTAGGAA TAGCCCCCCA CCTTCAGGGG
AGGACTATTA GCGCCATCAA GGTAATCGAT GGCCGCCTGC GCTGGCCTGT ACCCAAAAGC
TTACCTCAGA TTTTGCCGGG ACAGAAAATC CAGTCTATTG CGCGACGTGG AAAGTACTTG
TTGTTAGAAC TTGAAAAGGG CTGCCTTCTC ATCCATCTTG GAATGACAGG AACCTTACGG
GTATTACCAA GCTCAGAGCC TCTTAAATTG CATGATCGAG TTACATTTGA ATTTGGTCGT
TTAAGTTTGC GTTTACATGA CCCAAGAAAA TTTGGAGCGG TTTTATGGCA TCCTAAAATT
AAAGGGCCGG TAGAAAGCAA TCCACTTTTA TTAAAGCTTG GGGTAGAACC TTTTTCATCC
GCATTTGAAG GTGAGCTTGG AACAGGGATT TTGTATCAAG CTTCTCGTAA GCGAAGCGTA
GCCGTAAAGC AATTTCTTTT AGCGGGTCAA GCAGTTGTTG GAGTGGGCAA TATTTATTGT
TCTGAAAGTT TGTTTGAGGC AGGTATTCAT CCAGCTAAAG CTGCAGGTAA GCTGACACGC
CCTCAATGCT CACGACTGGC AAGCGCTGTG AGAAGTATTT TAAAAAAGGC AATAGATGCT
GGCGGTAGCA CTCTGAAAGA CTTTGTGAAT AGCGATGGCG ATCCTGGCCA CTTCACAGTG
CAATCTAAAG TGTACGATCG CAAGGGCCTG CCATGTAAAG TGTGCAAAAC CCCTATCCAA
CAGATTGTGC AAGGGCAACG CTCAACCTAT TTTTGCCCAG TATGTCAAAA ACGGTAA
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| Protein sequence | MPELPEVEVT KLGIAPHLQG RTISAIKVID GRLRWPVPKS LPQILPGQKI QSIARRGKYL
LLELEKGCLL IHLGMTGTLR VLPSSEPLKL HDRVTFEFGR LSLRLHDPRK FGAVLWHPKI
KGPVESNPLL LKLGVEPFSS AFEGELGTGI LYQASRKRSV AVKQFLLAGQ AVVGVGNIYC
SESLFEAGIH PAKAAGKLTR PQCSRLASAV RSILKKAIDA GGSTLKDFVN SDGDPGHFTV
QSKVYDRKGL PCKVCKTPIQ QIVQGQRSTY FCPVCQKR
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