Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1913 |
Symbol | |
ID | 5052992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1992439 |
End bp | 1992900 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640472087 |
Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_001156689 |
Protein GI | 145590092 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCC TGACCAATCT CTTTACCCCC GACTGCATTG CATTAGATAG CCCTGCCAAA AACAGAGCTG ATGCATTTGC AGCCGCCGGG GAGCTTTTCG CTAAACAAAC TGGTATCGAT GCAAATGCCG TTGTCAGCTT TCTTAACGCT CGTGAGGAAT TAGGCTCCAC AGCACTTGGT GCTGGCGTTG CCATACCGCA TGGTCGTGTT AAAGGCCTGA AACAGCCCGC AGCAGCTTTC ATCAGACTAA AAGACCCTAT CGAGTTTGCT GCCCCTGATG GTGAGTCGGT ATCTACCTTT ATTTTCTTAT TGGTTCCCGA AAAAGCCACG CAACAGCATT TGGAAATTTT GTCTTTCATC GCTCAGCTAC TATCAGACTC TGAGGCTCGT GGGGCACTAT CTTCTGCGAC TGACCCCGTC AAGGTATGTG AACTATTGCA ACATTGGGGA AATCCAAAAT GA
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Protein sequence | MNALTNLFTP DCIALDSPAK NRADAFAAAG ELFAKQTGID ANAVVSFLNA REELGSTALG AGVAIPHGRV KGLKQPAAAF IRLKDPIEFA APDGESVSTF IFLLVPEKAT QQHLEILSFI AQLLSDSEAR GALSSATDPV KVCELLQHWG NPK
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