Gene Pnuc_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1913 
Symbol 
ID5052992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1992439 
End bp1992900 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID640472087 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001156689 
Protein GI145590092 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCC TGACCAATCT CTTTACCCCC GACTGCATTG CATTAGATAG CCCTGCCAAA 
AACAGAGCTG ATGCATTTGC AGCCGCCGGG GAGCTTTTCG CTAAACAAAC TGGTATCGAT
GCAAATGCCG TTGTCAGCTT TCTTAACGCT CGTGAGGAAT TAGGCTCCAC AGCACTTGGT
GCTGGCGTTG CCATACCGCA TGGTCGTGTT AAAGGCCTGA AACAGCCCGC AGCAGCTTTC
ATCAGACTAA AAGACCCTAT CGAGTTTGCT GCCCCTGATG GTGAGTCGGT ATCTACCTTT
ATTTTCTTAT TGGTTCCCGA AAAAGCCACG CAACAGCATT TGGAAATTTT GTCTTTCATC
GCTCAGCTAC TATCAGACTC TGAGGCTCGT GGGGCACTAT CTTCTGCGAC TGACCCCGTC
AAGGTATGTG AACTATTGCA ACATTGGGGA AATCCAAAAT GA
 
Protein sequence
MNALTNLFTP DCIALDSPAK NRADAFAAAG ELFAKQTGID ANAVVSFLNA REELGSTALG 
AGVAIPHGRV KGLKQPAAAF IRLKDPIEFA APDGESVSTF IFLLVPEKAT QQHLEILSFI
AQLLSDSEAR GALSSATDPV KVCELLQHWG NPK