| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1908 |
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| Symbol | |
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| ID | 5052999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1989344 |
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| End bp | 1989916 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640472082 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_001156684 |
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| Protein GI | 145590087 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGAGCG CTTTTAATAC ACACACTACC AACCCTTTTA CTCAATATCC ACAAGCATGG
GAGCGTGCTG CTCACGTAAA GCTACTGGTG CTAGATGTTG ACGGTGTTTT AACAAATGGC
CAAGTATGGA TAGGGGCAGA CGGGAAAGAA TCTTTAAAGG CATTTGATAT TCAAGATGGT
TTAGGTATCA AATTATTAGA GCAATGCGGA ATCGCAACAG CCATTATTAC TGGCCGTAAC
TCTAAAATGG TTTTAGCACG CTGTGAAGAA CTGGGAATCA AGCATGTTCA TATGGGAGTT
GAGAATAAAT CAATCGCCTT AGCGCAAGTT CTAAATTCAC TTAGCCTTAC TCAAAACGAT
TGTGCAGTAA TGGGTGATGA CTGGCCGGAT TTAGCGATGA TGAAAAATGC CGGCTTGAAA
ATTTGCCCCG CTCAAGCACA TGAGGCCGTA AAAGAATATG TACATTATGT AACCATCCAT
ACTGGTGGTA ATAGCGCTGT GAGAGAAGTA TGTGACCTGA TTCTCAAAGC GCAAAATCAA
TACGACAAAC TCCTGAGCAA AGCCCGCGAC TAG
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| Protein sequence | MPSAFNTHTT NPFTQYPQAW ERAAHVKLLV LDVDGVLTNG QVWIGADGKE SLKAFDIQDG
LGIKLLEQCG IATAIITGRN SKMVLARCEE LGIKHVHMGV ENKSIALAQV LNSLSLTQND
CAVMGDDWPD LAMMKNAGLK ICPAQAHEAV KEYVHYVTIH TGGNSAVREV CDLILKAQNQ
YDKLLSKARD
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