| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1905 |
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| Symbol | |
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| ID | 5053408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1983411 |
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| End bp | 1986299 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472079 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001156681 |
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| Protein GI | 145590084 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAACG AAATCAAGAT CCGCGGTGCC CGCACCCACA ACCTCAAAAA CATCAATCTA
GACATCCCTA GAGAGAAACT GGTCGTCCTT ACTGGCCTCT CTGGTTCGGG CAAGAGCTCA
CTGGCTTTTG ACACCCTTTA TGCCGAGGGT CAACGCCGCT ACGTTGAATC CCTCTCAGCT
TATGCTCGTC AGTTTTTACA ACTCATGGAA AAACCAGACG TCGATACGAT TGAAGGTCTT
TCGCCTGCGA TTTCAATTGA GCAAAAAGCA ACAAGCCACA ACCCTCGCTC AACCGTTGGT
ACCGTCACTG AAATTCATGA TTACTTGCGC TTACTCTTTG CACGTGCAGG AACACCCCAC
TGCCCAGAAC ATGACCTTCC TTTAGAGGCA CAAAGTGTCT CGCAAATGGT TGATACCGTA
TTGTCAATGC CAGAAGACAC TAAGCTCATG ATTCTTGCGC CCGTAGTCAG TGAGCGCAAA
GGTGAGTTTG TTGACCTCTT TCAAGATTTA CAAGCACAAG GCTTTGTTCG TTTTCGCGTT
CGCTCAGGTG GTGGTACAGC CAACGCTGCT AAAGCAGAGA TTTTTGAAGT TGATCAATTA
CCTACGCTAA AGAAAAATGA CAAACACTCA ATCGAAGTAG TGGTTGATCG AATTAAAGTT
CGTCCAGATA TTCAACAACG TTTAGCGGAA TCTTTCGAAA CCTCCTTACG CTTAGCGGAT
GGCAAGGCAA TGATTGTGGA TATGGACACT GGCAAAGAGA TGATTTTCTC TAGTAAATTT
GCCTGTCCAG TTTGCTCTTA TTCCTTACAA GAATTAGAGC CTCGCTTATT CTCATTTAAT
AACCCGATGG GCGCCTGCCC TTCCTGCGAC GGCCTAGGTC ACCAGTCCTT CTTTGATCCT
AAGCGAATCG TAGCTCACCC CGATTTATCA CTAGCTTCTG GCGCTATCAA AGGCTGGGAT
CGCCGTAATC AGTTCTACTT CAAACTCCTT CAAACTCTTG CAAAGCATGG TGGGTTTGAC
GTTGAGAAAC CGTTTGAGAC ATTAAATAAG AAACAGCAAG ATTTGATTTT GCTTGGCTCT
GGTGATGTCA CCATTCCATT TGAATATATC AATGAGCGTG GCAAAAATAG TATTCGCGAA
CATGCCTTTG AAGGTATTGT TGCCAACTTT GAGAGACGCT ACCGCGAAAC CGATTCCATG
ACGGTTCGCG AAGAACTCTC TCGCTATCAA AATGTGCAAA CTTGCCCAGA ATGTAAAGGC
AGTCGTTTAC GCAAAGAAGC ACGTTTTGTC AAAGTGGGTG ATAAAAAACA ATCACGCGCT
ATTTATGAAA TTAGCGCTCT TCCACTGAAA GAAGCTAAAG AATATTTTGA AACCCTTGAG
CTCAAGGGTG CCAAACGAGA AATCGCCGAC AAGATTGTGA AAGAAATCGG TGCTCGCCTA
CGCTTTTTAA ATGATGTCGG CCTCGATTAC CTGTCTTTAG AGCGAAGCGC TGATACCCTT
TCTGGTGGCG AAGCTCAGCG TATTCGACTA GCATCCCAAA TTGGCTCTGG CCTAACGGGT
GTGATGTATG TTTTAGATGA ACCCTCTATT GGATTACATC AACGCGACAA TGATCGCCTC
ATTGGCACCC TCAAACATTT ACGAGATCTT GGTAATAGCG TTCTCGTAGT TGAGCATGAT
GAAGATATGA TTCGCGCCTC TGATTGGGTA ATTGACATTG GCCCTGGTGC CGGCATTCAT
GGTGGTGAGG TCGTTGCTCA AGGTACGCCG GCAGAAGTAG AAGCAAACTT GAATTCCTTA
ACCGGTGCTT ACCTGGCTGG CCGTGAGGCA ATTGCCGTTC CAGAAAAACG GATTCCAGTA
AGCGATCGTT TCTTAGAAAT TATTGGCGCA CGTGGGAATA ATTTGCAATC TGTTCATGCA
AAGATTCCAG TAGGTTTATT AACTTGCGTG ACTGGCGTAT CGGGCTCTGG TAAATCCACA
CTCATTAATG ACACCTTGCA TCATGCAGTT GCTCAACATT TATATGGCTC CAATGCAGAG
CCAGCAGCTC ATGATGCGAT CAAAGGCCTA GAGCATTTTG ATAAAGTCAT TAGCGTTGAT
CAGTCACCTA TTGGTAGGAC ACCTCGTTCT AATCCGGCCA CCTATACGGG CCTGTTTACT
CCAATCAGAG AACTCTTTGC TGGCGTTCCC GCATCACGTG AGCGCGGCTA CGAAGCCGGG
CGCTTCTCCT TTAACGTAAA GGGTGGGCGC TGTGATTCAT GTGAAGGCGA TGGCGTAATT
AAGGTAGAAA TGCACTTCTT GCCGGATGTG TATGTGCCTT GCGATGTATG TCATGGCAAA
CGTTATAACC GTGAAACTCT GGATATACGC TACAAAGGCA AAAATATCCA CGAAGTACTT
TCCATGACCA TTGAGCAAGC CTTTGAATTC TTCGAAGCGG TGCCGGTCGT TAAACGCAAA
CTGAAAACAC TATTAGATGT CGGCTTAGGT TATGTAAAGC TGGGACAAAG TGCTACCACT
CTATCGGGTG GTGAAGCGCA ACGCGTCAAG CTATCGCTAG AACTTTCTAA GCGCGATACA
GGGCGCACTC TTTACATCTT GGATGAACCT ACAACGGGCC TACATTTCCA CGATATCCAA
CTCTTGTTGA CTGTTATTCA AACACTCAAA AAGCAAGGTA ACACGATAGT CATCATTGAG
CACAATCTAG ATGTGATCAA AACGGCTGAT TGGATTATTG ATCTTGGGCC CAAGGGTGGT
GCTGGTGGCG GACAAATTAT TGCAACCGGA ACCCCTGAAG ATGTTGCAAA AAATGAACTC
AGTTTCACTG GTCATTATTT AGCACCTTTA TTGACTCGAA AGATCGTGAG CAGCAAAAAG
AAAAAATAA
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| Protein sequence | MNNEIKIRGA RTHNLKNINL DIPREKLVVL TGLSGSGKSS LAFDTLYAEG QRRYVESLSA
YARQFLQLME KPDVDTIEGL SPAISIEQKA TSHNPRSTVG TVTEIHDYLR LLFARAGTPH
CPEHDLPLEA QSVSQMVDTV LSMPEDTKLM ILAPVVSERK GEFVDLFQDL QAQGFVRFRV
RSGGGTANAA KAEIFEVDQL PTLKKNDKHS IEVVVDRIKV RPDIQQRLAE SFETSLRLAD
GKAMIVDMDT GKEMIFSSKF ACPVCSYSLQ ELEPRLFSFN NPMGACPSCD GLGHQSFFDP
KRIVAHPDLS LASGAIKGWD RRNQFYFKLL QTLAKHGGFD VEKPFETLNK KQQDLILLGS
GDVTIPFEYI NERGKNSIRE HAFEGIVANF ERRYRETDSM TVREELSRYQ NVQTCPECKG
SRLRKEARFV KVGDKKQSRA IYEISALPLK EAKEYFETLE LKGAKREIAD KIVKEIGARL
RFLNDVGLDY LSLERSADTL SGGEAQRIRL ASQIGSGLTG VMYVLDEPSI GLHQRDNDRL
IGTLKHLRDL GNSVLVVEHD EDMIRASDWV IDIGPGAGIH GGEVVAQGTP AEVEANLNSL
TGAYLAGREA IAVPEKRIPV SDRFLEIIGA RGNNLQSVHA KIPVGLLTCV TGVSGSGKST
LINDTLHHAV AQHLYGSNAE PAAHDAIKGL EHFDKVISVD QSPIGRTPRS NPATYTGLFT
PIRELFAGVP ASRERGYEAG RFSFNVKGGR CDSCEGDGVI KVEMHFLPDV YVPCDVCHGK
RYNRETLDIR YKGKNIHEVL SMTIEQAFEF FEAVPVVKRK LKTLLDVGLG YVKLGQSATT
LSGGEAQRVK LSLELSKRDT GRTLYILDEP TTGLHFHDIQ LLLTVIQTLK KQGNTIVIIE
HNLDVIKTAD WIIDLGPKGG AGGGQIIATG TPEDVAKNEL SFTGHYLAPL LTRKIVSSKK
KK
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