Gene Pnuc_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1898 
Symbol 
ID5052705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1973925 
End bp1974311 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content43% 
IMG OID640472072 
Producthypothetical protein 
Protein accessionYP_001156674 
Protein GI145590077 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.32912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAA CAAACATTGT GGTGCACCAA CACTCAAAAG TATTGGAGCT GTCTTATGAC 
GGCGGAGCTA TCTATAAATT ACCTTTTGAG TTGCTCAGAG TGTTATCTCC ATCTGCTGAA
GTGCAAGGCC ACGGACCAGG CCAGGAAACA TTGCAAACAG GCAAACGTGA TGTTGTGATT
TCTAGTCTAG AGCCTGTTGG ACATTACGCT TTAAAGCCCA CTTTTTCAGA CGGACATGAT
TCAGGGCTGT ATTCCTGGGA CTTCTTATAT TTCGTTTGTG AAAATCAAGA ACAGTTATGG
AAAGAGCATT TAGATAAATT GGCGTTAGCT GGTCTCGATC GTGATGCGCC AATGACAACT
AAAGGCCATT CTTGTGGAAG CCATTAA
 
Protein sequence
MIPTNIVVHQ HSKVLELSYD GGAIYKLPFE LLRVLSPSAE VQGHGPGQET LQTGKRDVVI 
SSLEPVGHYA LKPTFSDGHD SGLYSWDFLY FVCENQEQLW KEHLDKLALA GLDRDAPMTT
KGHSCGSH