Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1898 |
Symbol | |
ID | 5052705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1973925 |
End bp | 1974311 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640472072 |
Product | hypothetical protein |
Protein accession | YP_001156674 |
Protein GI | 145590077 |
COG category | [S] Function unknown |
COG ID | [COG3536] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.32912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCAA CAAACATTGT GGTGCACCAA CACTCAAAAG TATTGGAGCT GTCTTATGAC GGCGGAGCTA TCTATAAATT ACCTTTTGAG TTGCTCAGAG TGTTATCTCC ATCTGCTGAA GTGCAAGGCC ACGGACCAGG CCAGGAAACA TTGCAAACAG GCAAACGTGA TGTTGTGATT TCTAGTCTAG AGCCTGTTGG ACATTACGCT TTAAAGCCCA CTTTTTCAGA CGGACATGAT TCAGGGCTGT ATTCCTGGGA CTTCTTATAT TTCGTTTGTG AAAATCAAGA ACAGTTATGG AAAGAGCATT TAGATAAATT GGCGTTAGCT GGTCTCGATC GTGATGCGCC AATGACAACT AAAGGCCATT CTTGTGGAAG CCATTAA
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Protein sequence | MIPTNIVVHQ HSKVLELSYD GGAIYKLPFE LLRVLSPSAE VQGHGPGQET LQTGKRDVVI SSLEPVGHYA LKPTFSDGHD SGLYSWDFLY FVCENQEQLW KEHLDKLALA GLDRDAPMTT KGHSCGSH
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