Gene Pnuc_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1885 
Symbol 
ID5052687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1960636 
End bp1961037 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content49% 
IMG OID640472058 
Productribosomal protein S9 
Protein accessionYP_001156661 
Protein GI145590064 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000534939 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA ATTACGGAAA TTGGAATTAC GGTACTGGTC GTCGCAAGAG TTCTGTTGCG 
CGCGTATTCA TTAAATCTGG CAAGGGCGAC ATTATTGTTA ATGGCAAGCC TATCGATGCT
TATTTTGCTC GTGAAACATC ACGCATGATC GCTCGTCAGC CTTTGGCTCT CACGGCCCAC
TTAACGACCT TTGATATCAA AGTAAACGTT TCTGGTGGCG GTGAAACTGG CCAAGCTGGT
GCAGTTCGTC ACGGCGTTAC GCGTGCATTG ATCGACTACG ACAACGCGTT GAAGCCAACC
CTGTCTAAAG CAGGTTTGGT AACTCGCGAT GCTCGTGAAG TTGAGCGTAA AAAAGTTGGT
CTGCATGGCG CGCGTCGTCG TAAGCAGTTC AGCAAGCGCT AA
 
Protein sequence
MAINYGNWNY GTGRRKSSVA RVFIKSGKGD IIVNGKPIDA YFARETSRMI ARQPLALTAH 
LTTFDIKVNV SGGGETGQAG AVRHGVTRAL IDYDNALKPT LSKAGLVTRD AREVERKKVG
LHGARRRKQF SKR