Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1880 |
Symbol | ruvB |
ID | 5052150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1955487 |
End bp | 1956557 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640472053 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001156656 |
Protein GI | 145590059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00242586 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTC ATACAGACGA CCTCAGCTCT ATTCCAGAAG ATTTACCGGA AGGTAATGAC CGCATCGTCA GCGGGGCAGC TGGTAATACC GAGGCTGTTT TTGAAAGAGC CCTTCGCCCG AAACAACTCG ATGAGTATGT TGGTCAAACC AAAGCACGCG CCCAATTAGA AATTTTCATC AGCGCCACAA GAGCACGTCA AGAAGCTTTG GATCATGTTC TTTTGTTTGG ACCTCCAGGT CTTGGTAAGA CAACCCTTGC TCATATTATT GCTAGAGAGC TAGGTGTTAA TCTGCGTCAA ACAAGTGGTC CTGTCCTTGA TAGACCGGGC GACCTGGCCG CCTTACTTAC AAACCTAGAG ACCAATGATG TTCTGTTTAT CGATGAAATT CATCGCCTCT CTCCAGTTGT AGAAGAGATT CTCTACCCTG CACTAGAGGA CTACAGTCTG GACATCATGA TTGGTGAAGG CCCTGCTGCA CGTAGCGTGA AGATTGATCT TAAGCCCTTT ACTTTAATCG GCGCCACAAC ACGCGCTGGC ATGCTCACTA ATCCATTGCG TGATCGCTTT GGTATTGTCG CGCGACTTGA GTTCTATACA ACAGAAGAGC TCACCAAAAT TATTACTCGT TCAGCCAGCT TATTAAAAGC AAGCATTGAT CCAGAAGGAT CGATAGAGAT TGCTAAGCGT GCGCGTGGCA CCCCTCGAAT TGCAAACCGC CTGTTACGTC GTGTGCGTGA CTATGCAGAA GTAAAGGGTA CTGGCACTAT TACCAAAGCC ATGGCTGATG CTGCCCTAAA AATGCTCGAT GTAGACCCAA GCGGTTTTGA TGTCATGGAT AGAAAATTAC TTGAAGCTAT CTTGCACAAG TTTGATGGTG GTCCAGTTGG CATCGATAAT CTCGCTGCAG CAATTGGCGA GGAGCGCGAT ACCATTGAAG ATGTTCTAGA GCCCTACCTC ATTCAGCAAG GCTATCTACA GCGAACCTCA CGCGGCCGAG TAGCGACCCG TCAGGCATAT GAGCACTTTG GCTTAACGCC ACCTAGCGGA GTTGGCAGCC TAGAAATCTA A
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Protein sequence | MAIHTDDLSS IPEDLPEGND RIVSGAAGNT EAVFERALRP KQLDEYVGQT KARAQLEIFI SATRARQEAL DHVLLFGPPG LGKTTLAHII ARELGVNLRQ TSGPVLDRPG DLAALLTNLE TNDVLFIDEI HRLSPVVEEI LYPALEDYSL DIMIGEGPAA RSVKIDLKPF TLIGATTRAG MLTNPLRDRF GIVARLEFYT TEELTKIITR SASLLKASID PEGSIEIAKR ARGTPRIANR LLRRVRDYAE VKGTGTITKA MADAALKMLD VDPSGFDVMD RKLLEAILHK FDGGPVGIDN LAAAIGEERD TIEDVLEPYL IQQGYLQRTS RGRVATRQAY EHFGLTPPSG VGSLEI
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