Gene Pnuc_1879 details

Gene Information

• Locus tag: Pnuc_1879
• Symbol: ruvA
• ID: 5052149
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 1954888
• End bp: 1955469
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640472052
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001156655
• Protein GI: 145590058
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000619466
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGTC GCATTCAAGG TACTCTCGTT TCAGTTCATC CTCCTCGTCT ATTGGTGGAT 
TGCCAGGGCG TTGGTTATGA AATCGATGTG CCCATGAGCA CTTTGTATCA GCTACCTGAA 
GTAAATCAAA AAATTACCCT GCTCACCCAC TTTCAAGTAC GTGAGGATGC GCAACAGCTT 
TTTGGCTTTG CTACCGAGAT TGAGCGTGAA GCATTCAGGC AGTTAATTAA AATTAGTGGG 
GTGGGCTCAC GTACCGCTCT TGCAGTTCTC TCTGGCATGA GCGTGAACGA ATTGGCTCAA 
GCAATTGCCT TGCAAGAAGC TGGTCGACTC ACGCAAGTGC CTGGGATTGG CAAAAAAACT 
GCTGAGCGCC TTTGCTTGGA GCTTAAAGGC AAACTGGCAC CAGATCTTGG TATTACGGGT 
GGCAAACCAC AAGCCATTGA AGCAACTAGT GAAGTATTGC AAGCGCTTTT ATCATTAGGT 
TACTCCGAAA AAGAAGCGCT TTTAGCGCTG AAGCAAATCC CACCAGAGAC TAGTGTTTCC 
GATGGAATTC GGATGGGTCT AAAGTATCTA TCTAAGCCTT AA 

 

Protein sequence

MIGRIQGTLV SVHPPRLLVD CQGVGYEIDV PMSTLYQLPE VNQKITLLTH FQVREDAQQL 
FGFATEIERE AFRQLIKISG VGSRTALAVL SGMSVNELAQ AIALQEAGRL TQVPGIGKKT 
AERLCLELKG KLAPDLGITG GKPQAIEATS EVLQALLSLG YSEKEALLAL KQIPPETSVS 
DGIRMGLKYL SKP