Gene Pnuc_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1873 
Symbol 
ID5052969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1948700 
End bp1950076 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content46% 
IMG OID640472046 
Productpeptidase M24 
Protein accessionYP_001156649 
Protein GI145590052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTTA TTAATAACGC CCACCTCTAT CAAGCCCGTA GAAATGCTTT AGCAAAACAA 
ATGATCGCTA AAACAGGTGG TGGAATTGCT GTGATATCAA CAGCACCAGA ATTGGCTCGC 
AATCGAGATA GCGAATTTCC ATATCGTCAT GACAGTGATT TCTTTTATCT CACTGGATTT 
GAAGAGCCTG GCGCTACCTT GGTTTTAAAG GTAAATAAAA ATGGTAAAGA TCTGCATTTA 
GAGTCCCATT TATTTTGTAG GCCAAAAGAT CTTGAAAGGG AGATTTGGGA TGGTATTCGT 
CTTGGCCCTG AAGCTGCACC AGAAACATTA GGACTAGAGT ACGCATACAG TAACGAAAAT 
CTCGACCAAA AGCTCAGTGA ATTATTAGCC GATCAAGAAG CAATTTATGT TCGCCTTGCT 
GAAAGCGCTG AAGCTGATCG ACGTTTGCGG CATTGGATGA AGCAAGTCCG TGGGCAAGCG 
CGTTCGGGAG TAAATCCTCC GTCTGAATTA CATGATGTTG AAGCCTTGAT ACATGAAATG 
CGTTTATTCA AAGACGCTCA TGAAATTGAC ATCATGCGTC GTGCTGCTAC CATCTCCGCC 
CGCGCACATA TCCGCGCCAT GCAGATATGT AAACCCGGTA TGCGCGAATA CCAACTCGAA 
GCAGAGTTGC TTCATGAGTT TCGCAATAGT GGCGCGCAAA GTGTTGCCTA TAACAGTATC 
GTTGCGGGCG GCGCAAATTC CTGCATCCTT CACTATCGTG CTGGCTCAAC CGAATTACGC 
AGCGGAGAGT TGTGCTTAAT TGATGCCGGC TGTGAGTTAG ATGGATATGC CTCCGACATC 
ACCAGAACAT TTCCAGTAAA TGGAACATTT ACTGGTCCAC AGCGCGCTTT GTATGACATT 
ACCTTAGCCG CACAAGAAGC AGCCATTGCC ATGACTAAGC CAGGCAATAC TTTTATGCAG 
CCCCATGAAG CCGCATTAAA AGTACTGACG CAAGGCTTAC TAGATGAGAA GCTTCTGCAT 
TTATCAGAGG TGGGCTCAGT GGAAAACGCC ATTGAATCTG GGGCTTACCG TCGCTTCTAT 
ATGCATCGCA CCTCACACTG GTTAGGCATG GATGTTCACG ATGTTGGTTC TTATCGTGAG 
GTAGTTCAGG GTAATAATCA GGAAGACAAG CCGTGGAGAG TGCTAAGAAG TGGCATGGTC 
ATTACGATTG AGCCTGGTTT GTATGTACGG CCAGCAGATG ACGTAGACAA GGCCTTTTGG 
AACATTGGCA TTCGTATTGA GGATGATGCA GTAATTAATG ATTCAGGTTG TGAGTTAATT 
TCTCGCGGTG TGCCCGTGAA AGCAGATGAA ATCGAAGCGC TCATGAAAAA TGCATAA
 
Protein sequence
MQLINNAHLY QARRNALAKQ MIAKTGGGIA VISTAPELAR NRDSEFPYRH DSDFFYLTGF 
EEPGATLVLK VNKNGKDLHL ESHLFCRPKD LEREIWDGIR LGPEAAPETL GLEYAYSNEN 
LDQKLSELLA DQEAIYVRLA ESAEADRRLR HWMKQVRGQA RSGVNPPSEL HDVEALIHEM 
RLFKDAHEID IMRRAATISA RAHIRAMQIC KPGMREYQLE AELLHEFRNS GAQSVAYNSI 
VAGGANSCIL HYRAGSTELR SGELCLIDAG CELDGYASDI TRTFPVNGTF TGPQRALYDI 
TLAAQEAAIA MTKPGNTFMQ PHEAALKVLT QGLLDEKLLH LSEVGSVENA IESGAYRRFY 
MHRTSHWLGM DVHDVGSYRE VVQGNNQEDK PWRVLRSGMV ITIEPGLYVR PADDVDKAFW 
NIGIRIEDDA VINDSGCELI SRGVPVKADE IEALMKNA