| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1864 |
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| Symbol | glyS |
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| ID | 5053782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1937752 |
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| End bp | 1939890 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640472037 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001156640 |
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| Protein GI | 145590043 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAC CTAATTCACT TTCTCAATCA GCTACTTTGT TGATTGAAGT CTTCACAGAA
GAGTTGCCAC CAAAATCGCT TCGTCGCTTA GGAACATCTT TTAGTGAGGG TATTTTTGGC
GCCCTTAAAG CCGCTGGATT AACTACAGAA TCATCCAAGG TTACGAGCTT TGCAACACCG
CGCCGATTGG CAGTACAAAT TACTGACGTA CTGAGTCAAG CTAATGACTA TCCAGTGCGT
GAAAAACTAC TCCCTACTAG CATTGCTTTT GATGCCGATG GCAAAGCAAC GCCACCTCTA
CTCAAAAAAT TAAGTGCATT AGGTTATGCG GATCTCGACC TATCCACACT AGAAAAAGCA
GGAGAAGGAA AAAATGAAGC GCTTTTCCTT AATGTGATTG CTAAGGGTGC GGCCCTCGAG
CAAACCGCTC AAACAGCTCT CAATCAAACA TTGAGTAAAT TACCCATCGC CAAAATGATG
CACTATCAAG TGCTACAAAA AAATGGCCAA TTAGCAGATG TCCAATTTGC ACGCCCCGCC
CATCGTATTA TTGCTTTGCA CGGAGACACC ATTCTTAATA TGAGCAGTCT AGGCATAGAT
GCAAGTAATC AGACAGAGGG GCACCGCTTC CTAGCGCCGG GTGTGATCAC CATTACTGAC
GCTGATCAAT ATGAAAATAC TTTAGAAAAA CAAGCCAACG TATTGGCAAG CTTTGATAAA
CGTCGTACCC AAATTGAAAC TCAGCTATTG AAAGCGGCAG GCGCAGACTT AGTACTAATG
CCTGAGAGCT TATTAGATGA AGTGACTGCA TTGGTTGAGT GGCCCGCTAT TTATGAATGT
CACTTTGATG AAGAGTTCCT AGAGGTTCCT CAGGAATGCC TTATTTTGAC AATGCAAACC
AATCAAAAAT ATTTTGCATT GACTGATCAA CATGGAAAAC TGCGCAATCG TTTTCTGGTT
GTTTCTAATA TTGAAACGAA CAAGCCTGAT GCGATCATCT CTGGCAATGA ACGTGTAGTT
CGGCCCCGTC TATCGGATGC CCGTTTCTTC TTCCAACAAG ACCAGAAGCG CTCACTGGCA
TCTCGAGTTT CAGATCTCGG CAGAGTGGTT TATCACAATC AATTGGGCAA CCAATTGGAT
CGAACTAAAC GTGTTCAAGA AATTGCTATT GGAATCGCTC AAAAACTTCA AGTAGATGAC
AAATTAGCCA GTCGCGCTGC TGAAATTGCT AAGACCGACT TATTAACGGA TATGGTTGGA
GAATTTCCTG AACTTCAGGG AATTATGGGG CGCTATTATG CGAACCACGA TGGTGAGTCT
GCTGAAGTAG CGGCAGCTTG CAGCGAGCAC TACATGCCCA GATTCGCAGG TGATTCTTTG
CCCGCTACCC AAACCGGCAC TATTTTGGCA ATTGCCGACA AATTGGAAAC CTTAGTTGGT
ATTTGGGGTG TGGGTTTAGC GCCAACTGGC GATAAAGACC CCTACGCACT CCGTCGTCAC
GCTCTTGGTA TTTGCCGTCT CTTGCTTGAG AAAAACTTCT CTCTCAGCCT GCCTGAATTA
ATTGAACTCG CACGCAGTCA GTTTCCTCAA AAAGAAGTTC AAGAAAAAGC GGATGCTGCA
GCTATCTACG AATTTATCAT CGACCGCTTA CGTGCTTACT TGCGCGATCA ATCTGTGGCC
GGGAAACCAT TCACTAGCGC TGAAATTGAT GCTGTACTTA GTCAAGCCCC TGCTCAAATT
AATGATCTAA TCGGTCGCTT GAGTGCTCTT CGTGAATTTA ATGCGCTTCC ACAAGCAGCT
CAACTTGCTG CTGCCAATAA GCGAATCAGC AACATTCTCA AGAAAACCGC CACCCCTATA
CCCACAGCAT GCTCAAGCAA GCTACTACAA ATTCCTGCTG AAATTGAGCT TTTCCAAGCG
CTAGAAGCAA TTACACCTGC ACTCAATGCC GCGTATGAAC AGCGTCAATT TGTTGAGCTC
TTAAAAGCAT TGGTCGCATT AAGTGCGCCA ATTGACCAAT TCTTCGCAGA TGTCATGGTG
ATGGATCCTA ACCAAGAGCT ACGCGATAAC CGTCTTGCAC TTTTGCAACA ACTCCATCAG
AAAATGAATC TCGTTGCCGA TCTCGGCAAG TTAGCATGA
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| Protein sequence | MSTPNSLSQS ATLLIEVFTE ELPPKSLRRL GTSFSEGIFG ALKAAGLTTE SSKVTSFATP
RRLAVQITDV LSQANDYPVR EKLLPTSIAF DADGKATPPL LKKLSALGYA DLDLSTLEKA
GEGKNEALFL NVIAKGAALE QTAQTALNQT LSKLPIAKMM HYQVLQKNGQ LADVQFARPA
HRIIALHGDT ILNMSSLGID ASNQTEGHRF LAPGVITITD ADQYENTLEK QANVLASFDK
RRTQIETQLL KAAGADLVLM PESLLDEVTA LVEWPAIYEC HFDEEFLEVP QECLILTMQT
NQKYFALTDQ HGKLRNRFLV VSNIETNKPD AIISGNERVV RPRLSDARFF FQQDQKRSLA
SRVSDLGRVV YHNQLGNQLD RTKRVQEIAI GIAQKLQVDD KLASRAAEIA KTDLLTDMVG
EFPELQGIMG RYYANHDGES AEVAAACSEH YMPRFAGDSL PATQTGTILA IADKLETLVG
IWGVGLAPTG DKDPYALRRH ALGICRLLLE KNFSLSLPEL IELARSQFPQ KEVQEKADAA
AIYEFIIDRL RAYLRDQSVA GKPFTSAEID AVLSQAPAQI NDLIGRLSAL REFNALPQAA
QLAAANKRIS NILKKTATPI PTACSSKLLQ IPAEIELFQA LEAITPALNA AYEQRQFVEL
LKALVALSAP IDQFFADVMV MDPNQELRDN RLALLQQLHQ KMNLVADLGK LA
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