Gene Pnuc_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1858 
Symbol 
ID5052649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1931228 
End bp1932490 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content44% 
IMG OID640472031 
Producthypothetical protein 
Protein accessionYP_001156634 
Protein GI145590037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.810653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTA CCGCTACAGA ACTCGGCGCA ACAATTATTT TTGCAATCGC AGTTTTGCAT 
ACTTTTTGCA CGGGTTATTT TGAAACTCTC GCTCACCAGT CTCGTCGACA TGCCGGTCTT 
TGGCATTTAC TGGGTGAAGT AGAAATTGTT TTTGGTTTTT GGGCTGCAAT TTTGGTTATT 
TTTATCAGCC TCTACGATGA CCTCAATACT GCCAAAGCAT TCCTAAATAA ACGCAACTTT 
ACTGAGCCTT TATTTGTTTT TGCCATCATG ATTGTGGCTG GAAGCAAACC GATACTCTAT 
GTGTCAACCC AATTCCTGCA TACCTTAGCG CGGGCACTTC AATTTCTCTT GCGACTGAAA 
AAAGCACCGG CTTTATATTT TTTAACGCTT GCCATTACAC CTCTCTTGGG TTCAGTCATC 
ACTGAGCCAG CTGCAATGAC CTTGGCCGCA TTCTTACTAC GAGATTTGGT ATACCGCCAT 
CAATGTTCTA AAGCATTATT GTTTGGCACG CTCGGAGTGT TATTTGTCAA TATTTCTATT 
GGCGGAACTC TGACTAATTT TGCAGCGCCT CCCGTTCTCA TGGTAGCAAC GACCTGGGAC 
TGGAGCTCAG CATTTATGTT CACTAATTTT GGCCTTGAAT CTAGTATTGC CATCTTCATC 
AATGCGTTGG GCGCAACACT ACTGTTTCAT CGTCAGTTGG TTGAACCTGT CACGAATAGC 
ACGACTACTA AAGTACCCCT TGCAGTGATC TTGATGCACT TGTTATTTTT ATGTGGCGTA 
GTAGTGTTTG CACATGATCC TATTATTTTT ATGTGGCTAT TACTTTTCTT TATTGGTTAC 
ACAACAGCGT ATCCCAAACA TCAAAGCCCA CTTATTTTGA AAGAAGCTCT ACTAGTTGGT 
TTTTTCTTGG GAGGATTAGT AGTTTTGGGG GCTCTTCAAG GATGGTGGTT ACAACCGATC 
CTGAGCATGA TGGAACCAAC GGCCGTCTTT TATGGCAGCC TCGCGCTTAC CGCTATTACC 
GATAATGCTG CATTGACCTA TTTAGGCTCA CTGGTAACTG GCACCTCCCC GGAATTTAAA 
CTGGCATTGG TAGGCGGCGC TGTTGCTGGC GGAGGATTAA CGGTGATTGC AAATGCACCC 
AATCCAGCTG GTATTGCAAT CTTGCGTCAT CACTTTCCCA ATGGGGCCGT ATCTGCATTA 
CATCTTCTCA TTGCCGCTAT ACCCCCTACA GTGGTGGCTA TTTTTGCTTA TCGCGTTTTT 
TAA
 
Protein sequence
MNFTATELGA TIIFAIAVLH TFCTGYFETL AHQSRRHAGL WHLLGEVEIV FGFWAAILVI 
FISLYDDLNT AKAFLNKRNF TEPLFVFAIM IVAGSKPILY VSTQFLHTLA RALQFLLRLK 
KAPALYFLTL AITPLLGSVI TEPAAMTLAA FLLRDLVYRH QCSKALLFGT LGVLFVNISI 
GGTLTNFAAP PVLMVATTWD WSSAFMFTNF GLESSIAIFI NALGATLLFH RQLVEPVTNS 
TTTKVPLAVI LMHLLFLCGV VVFAHDPIIF MWLLLFFIGY TTAYPKHQSP LILKEALLVG 
FFLGGLVVLG ALQGWWLQPI LSMMEPTAVF YGSLALTAIT DNAALTYLGS LVTGTSPEFK 
LALVGGAVAG GGLTVIANAP NPAGIAILRH HFPNGAVSAL HLLIAAIPPT VVAIFAYRVF