Gene Pnuc_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1854 
Symbol 
ID5051933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1929593 
End bp1929955 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content45% 
IMG OID640472027 
Producthypothetical protein 
Protein accessionYP_001156630 
Protein GI145590033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.834585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TCCTAGTCGT TTTAGCCGCT CTTGGCGCCT TTTCAGGCCT TGTGCAAGCT 
CAAGAAAAAA TCCAAGTGCT CAGCACCCAA GAGCTGGTAA ATGTTTGCAA ATTACCTGCA 
AGCCCTGAAT CACGTAGCTT CTGTGTTGGC TATGCCACTA GCGTATATGA CACTTATTTA 
GTAACTCGTC ACCCACAACG CGCAAAACCT TTTATCTGTG TAAAACAACC AGCGCCACAA 
CGTGATGTTG TTATTGGTGA CTTTGTTAAA TGGGCTGGGG AAAACCAACA ATTCGCTGAC 
AAACCTGCAG CTGGTGTATT CCTAGGCTTT TTGGCTGATC GCTTTCCATG TGGCAAGAAA 
TAA
 
Protein sequence
MKKVLVVLAA LGAFSGLVQA QEKIQVLSTQ ELVNVCKLPA SPESRSFCVG YATSVYDTYL 
VTRHPQRAKP FICVKQPAPQ RDVVIGDFVK WAGENQQFAD KPAAGVFLGF LADRFPCGKK