Gene Pnuc_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1852 
Symbol 
ID5051900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1928818 
End bp1929342 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID640472026 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001156629 
Protein GI145590032 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATAT TTGAACTGGA CGGAAATGCC CCTCAACTTG CCCAGGGCGC GTGGGTTGCT 
GAAAGTGCTG AAGTTATCGG CAGGGTAGAA CTGCATCGAA ATGCCAATAT TTGGCCAAAT
GTTGTTATTC GTGGCGATAA CGATTTAATT CAGATTGGCG AAGGAAGCAA TGTGCAGGAC
GCTTCTGTAT TGCATACCGA TCCCGGATAT GAGCTCATTA TCGGCAAAGA AGTTACCGTT
GGTCATAAGG TGATGCTTCA TGGCTGCCAT ATTGGCGATG GTAGTTTGAT TGGCATTGGC
GCGGTTATCT TAAATGGCGC CAAAATTGGA AAGCACTGTC TTGTAGGTGC GGGTGCACTC
GTCACTGAAG GTAAAGAGTT TCCTGATAAT TCTATGATTT TGGGTTCACC AGCCAAGGTT
GTAAAGACGC TGAGTCCCGA ACAAACTGCA GGTATGCAAG ATATCGCTGG ACGCTATGTA
AAAAATGCTC AGCGCTATAT CAAGACCTTG AAAAAGATCG CCTAA
 
Protein sequence
MAIFELDGNA PQLAQGAWVA ESAEVIGRVE LHRNANIWPN VVIRGDNDLI QIGEGSNVQD 
ASVLHTDPGY ELIIGKEVTV GHKVMLHGCH IGDGSLIGIG AVILNGAKIG KHCLVGAGAL
VTEGKEFPDN SMILGSPAKV VKTLSPEQTA GMQDIAGRYV KNAQRYIKTL KKIA