Gene Pnuc_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1833 
Symbol 
ID5053755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1913680 
End bp1914771 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID640472006 
ProductrecA protein 
Protein accessionYP_001156610 
Protein GI145590013 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0352919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTGG ATGACAAAAG AAAATCAGCC TCCTCAGAAT TTGAGGGAAT GAGTGGAGAC 
AAACAAAAAG CATTAACTGC GGCTTTAGCG CAAATTGAAA AGCAATTTGG CAAAGGTTCA 
ATCATGAGAT TGGGCGACGC TGAAATCAGT CAAGATATTC AAGTGGTGTC CAGTGGTTCA 
TTAGGTCTTG ATATCGCCTT AGGAGTTGGC GGTCTTGCAC GTGGTCGAGT GATTGAAATC 
TACGGCCCTG AATCATCAGG TAAAACAACT TTGACATTGC ACGCTATTGC AGAAATGCAA 
AAGCTTGGCG GCACCTGCGC CTTTATTGAT GCAGAGCATG CTTTAGATGT TCAGTACGCA 
TCACGTCTTG GTGTTGATGT AAATAATCTC TTGATCTCTC AACCAGATAC TGGCGAGCAA 
GCTTTGGAAA TCGCTGATGC ATTAGTGCGC TCAGGTTCGA TTGATTTGAT CGTTATTGAC 
TCAGTGGCGG CCTTGGTTCC TAGGGCTGAA ATTGAAGGCG ATATGGGCGA CTCCTTGCCT 
GGCCTGCAGG CACGCTTGAT GAGTCAAGCC TTGCGTAAGT TAACGGGCGC TATCAAGCGT 
ACAAACACCA CCGTAATCTT CATTAATCAG ATTCGTATGA AGATTGGCGT GATGTTTGGC 
TCCCCAGAAA CTACTACAGG CGGTAACGCA CTGAAGTTCT ATGCCTCTAT GCGTTTAGAT 
ATTCGCCGTA TTGGCAGCAT CAAAAAAGGT GACGAGGTTG TTGGTAATGA AACTCGCGTC 
AAGGTTGTGA AGAATAAAGT TTCTCCTCCA TTCCGCGAAG CTATTTTTGA CATCATGTAT 
GGCGCTGGTA TTTCAAGAGA AGGTGAAATC ATTGATATGG GTGTTGAGGC CGATATTGTT 
GATAAGTCAG GTTCTTGGTA TAGCTATAAC GGTGATCGCA TTGGTCAAGG CAAGGATAAC 
GTGCGTGAGT TCTTAAAAGA GAATCCAGCA ATTGCTAAAG ATATTGAAGC TAAGATCCGC 
GAGAAACTGG GTGTGAAATC TGGTTCGGCA GTAGTTACTG ATGTATTGAG TGAAGAAGAG 
GAAGTCGAAT AA
 
Protein sequence
MALDDKRKSA SSEFEGMSGD KQKALTAALA QIEKQFGKGS IMRLGDAEIS QDIQVVSSGS 
LGLDIALGVG GLARGRVIEI YGPESSGKTT LTLHAIAEMQ KLGGTCAFID AEHALDVQYA 
SRLGVDVNNL LISQPDTGEQ ALEIADALVR SGSIDLIVID SVAALVPRAE IEGDMGDSLP 
GLQARLMSQA LRKLTGAIKR TNTTVIFINQ IRMKIGVMFG SPETTTGGNA LKFYASMRLD 
IRRIGSIKKG DEVVGNETRV KVVKNKVSPP FREAIFDIMY GAGISREGEI IDMGVEADIV 
DKSGSWYSYN GDRIGQGKDN VREFLKENPA IAKDIEAKIR EKLGVKSGSA VVTDVLSEEE 
EVE