Gene Pnuc_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1822 
Symbol 
ID5052111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1901557 
End bp1902177 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content44% 
IMG OID640471995 
Producthypothetical protein 
Protein accessionYP_001156599 
Protein GI145590002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATC AAGTACTTCG CTCATTAGTT AAATGGCCTA ATGTTCCCGA GTGTTTTGGC 
TGGCTTGCAC TAGATCGTCG TGGGCAATGG CGTATGCGTG ATGAATTCGC CCAGCAAAAT 
CACTTATCTG GCCAAGTCAT AGTGCATCGC GCCCTAAGTG AATTTATCTC CAGAAATTAT 
GCATGTGACC AAGCAGGAAA TTACTTTTTT CAAAATGGTC CACAACGTGT GTTTGTCACC 
CTAGATTACA CACCTTGGAT AGTACGTATT ACCCCTGCGC AAGAAGGATC ACAATTCCTC 
ACCCAATGTC AAACCCCATT TGCACCCAGC GCAGCATTCA GCGATGAGCA GGGAAATATT 
TATATTGCTG GGTCTACCCA TCAAACTATT GATGAGAATA ATCAAAAACA GTCTTTTGTT 
AATGAAGCAT GCCAAAGTGT GGCGATACTG CATGATCACG ATCTAGATCA TTTTTCTGAA 
TTAGCTATCC TGCGTGAACA AGCTTGTAGC TTTGGCGGGT CTTGGACCTG GCATGGAAAA 
CAGCTGCCCT TAGACCCCAT CCTTTCTAAC GAATTAAGTC AGCGCTTTCA TTACATCAAA 
AGTCCCACGC CTACTACCTA A
 
Protein sequence
MDDQVLRSLV KWPNVPECFG WLALDRRGQW RMRDEFAQQN HLSGQVIVHR ALSEFISRNY 
ACDQAGNYFF QNGPQRVFVT LDYTPWIVRI TPAQEGSQFL TQCQTPFAPS AAFSDEQGNI 
YIAGSTHQTI DENNQKQSFV NEACQSVAIL HDHDLDHFSE LAILREQACS FGGSWTWHGK 
QLPLDPILSN ELSQRFHYIK SPTPTT