| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1816 |
|---|
| Symbol | |
|---|
| ID | 5053490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 1896032 |
|---|
| End bp | 1897468 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640471989 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_001156593 |
|---|
| Protein GI | 145589996 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0923913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGAG CAACCAAAAT CATTGCAACC TTAGGGCCTG CCTCAGAAAA GCCTGAAGTG
TTACGCGAGA TGATTCGTGC GGGCGTAGAT GTAGTGCGTA TGAATTTTTC ACATGGCACT
GTAGCGGATC ACAAAGCACG TCATGATTTA GTGCGCAGCA TTTCTGCTGA GGTAGGTAAA
GAAGTCGGAA TTATGGCCGA CCTACAGGGG CCAAAGATTC GAGTAGGAAA ATTTGAAGAC
AGCAAAATCT TGCTTCAAGA AGGTGAAAAA TTTATTTTAG ATGTGGCATG CGAGCTCGGC
AATCAAGGGC GCATAGGACT GGACTACAAA GAGTTGCCAA ATGATGTGAA ACCAGGTGAC
CGTCTTTTAT TAAATGATGG CTTAGTGGTG CTGCGTGTTG AGAGCGTCAA GGGCGGTGAG
ATTTTCACGT TAGTAGAGCA AGGTGGTCCG CTATCCAACA ATAAAGGTAT TAATCGAGCT
GGCGGCGGCT TAACAGCACC AGCATTAACA GAAAAAGATA TTGCTGATTT GGATGCTGCG
ATTGCTATGG GTGTAGATTT TCTCGCTATT AGCTTCCCAA AGGATGGGGC TGATATGGCA
TATGCGCGTC GTTTAGCTGA TGCAGCGAGT GTTAAATATG GAGTTGGCAA AGTAAGAACG
ATTGCCAAGG TAGAGCGTGC TGAAGCGATT GAGGCTGAAG CCTTAAAGAG CATCATCGCC
GAGAGCGATG GAATTATGGT AGCTCGTGGA GATCTCGCTA TCGAGGTTGG CAATGCAGCT
GTGCCTGCAT TGCAAAAGCG CATGATTAAG TGGGCACGCG AAGCCGATAA ATTTACAATC
ACCGCCACTC AAATGATGGA GTCTATGATT AGTGCACCTG TGCCAACTCG TGCAGAAGTA
AGTGATGTGG CAAATGCTGT ATTAGATGGT ACCGATGCTG TGATGTTGTC TGCTGAGTCT
GCTGCAGGTT CTTACCCAGT GCAGACAATT AAAGCCATGG CAGAAATATG CATAGAGGCG
GAGAAATCTG ATCCAGTGAA ATTGGATACA GATTTTTTAG ATCAAACTTT TGCGCGTATT
GACCAGACGA TTGCCTTGGG CGCATTATTT ACGGCTCACC ATTTACACGC TAATGCCATC
GCAGCATTGA CGGATTCTGG ATCTACTGCC GTGTGGATGA GTCGTCACAA TATCCATGTT
CCGATTTTTG CGCTGACTTC GAAGATCGCA ACGCAGCGCG CATTGAGTAC TTACCGTAAT
GTGACTCCAA TAGGGCTTGA TTACACCAAA GAGCGAGATA CAGCATTGCA AGAGGTGGAA
ACCTGCCTAA AGAAGGCGGG CGCGGTAAAG GCTGGAGATA CCGTGGTGTT GACCTCTGGA
GAACCCATGG GCGAACCAGG CGGTACCAAC AGTCTCAAAA TTATTCATGT GAAGTAA
|
|---|
| Protein sequence | MLRATKIIAT LGPASEKPEV LREMIRAGVD VVRMNFSHGT VADHKARHDL VRSISAEVGK
EVGIMADLQG PKIRVGKFED SKILLQEGEK FILDVACELG NQGRIGLDYK ELPNDVKPGD
RLLLNDGLVV LRVESVKGGE IFTLVEQGGP LSNNKGINRA GGGLTAPALT EKDIADLDAA
IAMGVDFLAI SFPKDGADMA YARRLADAAS VKYGVGKVRT IAKVERAEAI EAEALKSIIA
ESDGIMVARG DLAIEVGNAA VPALQKRMIK WAREADKFTI TATQMMESMI SAPVPTRAEV
SDVANAVLDG TDAVMLSAES AAGSYPVQTI KAMAEICIEA EKSDPVKLDT DFLDQTFARI
DQTIALGALF TAHHLHANAI AALTDSGSTA VWMSRHNIHV PIFALTSKIA TQRALSTYRN
VTPIGLDYTK ERDTALQEVE TCLKKAGAVK AGDTVVLTSG EPMGEPGGTN SLKIIHVK
|
|---|
| |