Gene Pnuc_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1811 
Symbol 
ID5052304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1891208 
End bp1892296 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content47% 
IMG OID640471984 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_001156588 
Protein GI145589991 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.101238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGCG ATAGTACGGC ACTGCAATCT TCAGTAGTGA TCAATGAAGC AGTTCAAAGC 
TTACGAGACG GTGGTCTAGT AGCCTTTCCA ACGGAAACAG TTTACGGCCT AGGCGCTGAT 
GCTAAAAATC CTGAAGCTAT CAAAAAGATC TTTAGTACCA AGGGTCGCCC CTCCAATCAT 
CCCTTAATAG TGCATTTAGC AGCGCCCGAT AGGTTTGATC AGGCACAAGT GGATTGGGTT 
CCAGTTTTGG CGCCATGGGT TCGGGATTTG TCTGAGGACG CATTAAAACT CATTAATGCA 
TTTTGGCCAG GCCCCCTAAC CCTGGTCTTT AAAAAAGATA AAAGCGTATT AAATGAATTA 
ACTGGGGGCC AAGATACCGT AGCCATTCGT GCTCCTGCAC ACCCCATCGC GCAAGAACTA 
TTGCGTAAAT TTAAAGGTGG TGTGGTTGCG CCTTCTGCAA ACCGATTTGG AAAAGTATCA 
CCCACTAGTG CGGCAGATGT AAGGCATGAG TTTGAAGGTG TGTTGGATTT AATGGTGTTA 
GATGGTGGTG ATTGTGAAGT CGGTATTGAG TCGACCATCA TTGACCTATC TTCTGGAGAT 
AGAGCGATCC TATTGAGGCC TGGCGTTATT ACGCCTAGTG TGATTTTGGC GAAGACGGGA 
ATTCGGGTTT ATCAGCCGGG CGAGGTATTT AGCGAAACTG AGCTCTTGCC TAAGGTGTCT 
GGCAGCTTAA AAGCGCATTA CGCTCCAACA ACCCCTTTAC GTCTGTATGC ATCAGGACGC 
GTTTTAGATG CTTTAAGTGA ATTTCCAGAC ACCAAATCAC GTGTTGCAGT TGCAGTCTGG 
GATTCTGAAT CGTCCTTAAG TCATGATGGG TATCCATTAG TACACTTTGA AGAGGTTGTT 
ATCCCGAGTG ATAGCGCTAC ATTTGCGAGC CGCTTGTATC GATCGCTGCG AGACTTAGAC 
CAGCAGGATT GGGATTTAAT TTTATTTCCT GAACCACCAG TTGGCGAGGA GTGGGACGGC 
GTTCGAGATC GACTTCAGCG TGCTTGTTTT GGTTCTGGAC CGTCTTCAAG CAACCACGTA 
AGTAATTGA
 
Protein sequence
MSSDSTALQS SVVINEAVQS LRDGGLVAFP TETVYGLGAD AKNPEAIKKI FSTKGRPSNH 
PLIVHLAAPD RFDQAQVDWV PVLAPWVRDL SEDALKLINA FWPGPLTLVF KKDKSVLNEL 
TGGQDTVAIR APAHPIAQEL LRKFKGGVVA PSANRFGKVS PTSAADVRHE FEGVLDLMVL 
DGGDCEVGIE STIIDLSSGD RAILLRPGVI TPSVILAKTG IRVYQPGEVF SETELLPKVS 
GSLKAHYAPT TPLRLYASGR VLDALSEFPD TKSRVAVAVW DSESSLSHDG YPLVHFEEVV 
IPSDSATFAS RLYRSLRDLD QQDWDLILFP EPPVGEEWDG VRDRLQRACF GSGPSSSNHV 
SN