| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1805 |
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| Symbol | groEL |
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| ID | 5052121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1883492 |
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| End bp | 1885144 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471978 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001156582 |
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| Protein GI | 145589985 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000135763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGACGTTGT ATTTGGAGAT AGCGCTCGCA CCAAGATGGT GGAAGGCGTA
AACATTCTTG CTAATGCAGT TAAAACAACT TTAGGACCAA AAGGTCGCAA TGTTGTGATC
GAGCGTTCAT TCGGCGGCCC TACCATCACT AAAGACGGTG TGTCCGTTGC AAAAGAAATC
GAACTTAAAG ACAAGCTGCA AAACATGGGC GCGCAGATGG TTAAGGAAGT TGCTTCCAAA
ACTGCTGACA TCGCTGGCGA CGGCACAACT ACCGCTACGG TTTTGGCTCA GTCTATCGTT
CGTGAAGGCA TGAAGTATGT AGTTTCAGGC CATAACCCAA TGGACTTGAA GCGTGGTATC
GATAAAGCTG TTACAGCTGC AATCGCAGAG CTCGCAAAAA TTAGCAAGCC TTGCACGACC
ACTAAAGAAA TTGCTCAGGT AGGTTCTATC TCTGCAAACA GCGATCATAG TATTGGTCAG
CGCATTGCAG AAGCAATGGA AAAAGTAGGT AAAGAAGGCG TTATCACTGT TGAAGATGGT
AAGTCTTTAG AGGACGAGCT CGAAGTCGTT GAAGGTATGC AGTTTGATCG TGGCTACCTT
TCTCCATACT TCATCAATCA ACCAGAAAAG CAAGTTGCTG TATTGGAAAG CCCATACGTT
CTCTTGTTTG ATAAGAAGAT TGCTAACATC CGTGATTTGT TACCAGTACT CGAGCAAGTA
GCAAAGTCTG GCCGTCCTTT GTTGATCATT GCTGAAGATG TTGAAGGCGA AGCCTTAGCA
ACTTTGGTTG TAAACAACAT TCGCGGCATT ATCAAGACTT GTGCTGTTAA GGCTCCAGGA
TTTGGTGATC GTCGTAAAGC CATGTTGGAA GACATCGCTA TCTTGACTGG CGGAACTGTT
ATCGCTGAAG AAATCGGCCT GACACTCGAG AAAGCAACTC TTGAGCACTT GGGTCAAGCA
AAGCGTATCG AAGTAGGCAA AGAAAATACC ATCATCATTG ATGGTGCTGG CGATGCTAAA
GCGATTGAAG CTCGCGTGAA GAACATTCGT GTTCAGATCG AAGAAGCGAC TAGCGATTAC
GACAAGGAAA AATTGCAAGA GCGTGTAGCT AAATTAGCTG GCGGTGTTGC GGTGATTCGT
GTTGGCGCTG CTACTGAAGT TGAAATGAAA GAGAAGAAAG CTCGCGTTGA TGATGCATTG
CATGCAACTC GTGCTGCCGT GGAAGAAGGT ATTGTTCCTG GCGGTGGCGT AGCATTGATT
CGTGCTATGC AAGGTATCAA GGGATTGAAA GGCGATAACG CTGATCAAGA CGCTGGTATC
AGCATCGTAT TGCGCGCTAT GCAAGAGCCA TTACGTACTA TCGTTAGCAA CGCCGGTGAA
GATGCTGGTG TAGTTGTTAA TGCGGTACAA GCAAGCACAG GCAATAACGG TTACAACGCT
GCTACTGGTG AGTATGGCGA CTTGGTTGCT CAAGGTGTTA TTGATCCTAC TAAGGTAACA
AAAACTGCAT TGGTAAATGC TGCTTCTGTT GCTGGCCTCT TGTTGACTAC TGACTGCGCA
ATCTCCGAGG CACCAAAAGA TGAGTCTGGT GCTGGTGGAA TGCCTGATAT GGGTGGTATG
GGCGGTATGG GTGGTATGGG CGGCATGATG TAA
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| Protein sequence | MAAKDVVFGD SARTKMVEGV NILANAVKTT LGPKGRNVVI ERSFGGPTIT KDGVSVAKEI
ELKDKLQNMG AQMVKEVASK TADIAGDGTT TATVLAQSIV REGMKYVVSG HNPMDLKRGI
DKAVTAAIAE LAKISKPCTT TKEIAQVGSI SANSDHSIGQ RIAEAMEKVG KEGVITVEDG
KSLEDELEVV EGMQFDRGYL SPYFINQPEK QVAVLESPYV LLFDKKIANI RDLLPVLEQV
AKSGRPLLII AEDVEGEALA TLVVNNIRGI IKTCAVKAPG FGDRRKAMLE DIAILTGGTV
IAEEIGLTLE KATLEHLGQA KRIEVGKENT IIIDGAGDAK AIEARVKNIR VQIEEATSDY
DKEKLQERVA KLAGGVAVIR VGAATEVEMK EKKARVDDAL HATRAAVEEG IVPGGGVALI
RAMQGIKGLK GDNADQDAGI SIVLRAMQEP LRTIVSNAGE DAGVVVNAVQ ASTGNNGYNA
ATGEYGDLVA QGVIDPTKVT KTALVNAASV AGLLLTTDCA ISEAPKDESG AGGMPDMGGM
GGMGGMGGMM
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