Gene Pnuc_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1802 
Symbol 
ID5052308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1880993 
End bp1881826 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID640471975 
Producthypothetical protein 
Protein accessionYP_001156579 
Protein GI145589982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0235014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TAGACGCATT TATATTTTTC AATGAAATTG ATACGTTAAA GATTCGACTG 
GGTCTTCTTT ATGAGAAAGT AGACCAGTTT GTAATATGCG AATCTAACAT TACTCATAGT 
GGGCAAACAA AGAAATACAA TTTTCTAGAC CGTCAAAGTG AATTTTTGCC ATGGTTAGAT 
AAAATTACGT TTCTTCAGTA TGAGCCAGAT GTAAGTCACC TTGATTTCAC CAAAAAAGAT 
GAGGCCTACA ACCCATCTTC CGCTTCTTGG CAAATCGAGA CGGGGCAAAG AAACTATCTT 
GGCAGCTATA TAAGAAATCT CAATTCTGAA GACATGGTTA TGGTCTGCGA CGTTGATGAA 
ATATGGAATC CTACCTTTGC AGACTTTATT AGATCTGGGC AATATGAGCT AGATGCCGCT 
AGAATGGAAA TGCAATTTCA TCACTATTAT TTAAATTGCG TAGGTATTAG TCAAAGCAAC 
TCCAAATGGA TTCATGCATT TTGTGCAAAA GCGTCTTATT TAAAAACAAA GCAAAATATC 
TCCCAAATTA GAGTCGGTGA GCAGCTTCCA ATTGTTGCTG GTGTTGGCTG GCATTTCTCC 
TACTTAGGAG GCGCCCAAAA AATATCTGAA AAGATTCATG CTTTTGCACA TCAAGAAACC 
AACACAGCAG AAATTAACAA CTTAAAGCAT CTAGAAAACT GCATCAACCT TGGAATAGAC 
CACCTCGGCA GACCAGATCA TGAGTGGGCC TTTCACCCGC TTGGCTACTA CCCTCCTGAT 
ATCAAGGCTG AAATGGAAAA ATTTCCGCAT TTAATCAAAA AAAGTTTGGT TTAA
 
Protein sequence
MKIIDAFIFF NEIDTLKIRL GLLYEKVDQF VICESNITHS GQTKKYNFLD RQSEFLPWLD 
KITFLQYEPD VSHLDFTKKD EAYNPSSASW QIETGQRNYL GSYIRNLNSE DMVMVCDVDE 
IWNPTFADFI RSGQYELDAA RMEMQFHHYY LNCVGISQSN SKWIHAFCAK ASYLKTKQNI 
SQIRVGEQLP IVAGVGWHFS YLGGAQKISE KIHAFAHQET NTAEINNLKH LENCINLGID 
HLGRPDHEWA FHPLGYYPPD IKAEMEKFPH LIKKSLV