Gene Pnuc_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1797 
Symbol 
ID5053773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1876167 
End bp1877297 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content48% 
IMG OID640471970 
ProductNAD(P) transhydrogenase subunit alpha 
Protein accessionYP_001156574 
Protein GI145589977 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.379193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATAG GAGTGCCGCT GGAAACAAGG CCCGGGGAAA CTCGAGTAGC CGCCACACCA 
GAAACCGTTA AAAAATTAAT TGGTCAAGGT CATACTGTTG TGATTCAAAA AGATGCTGGA 
GTAAAAGCTA GTCAACCTGA CTCTGCGTAT GAGGCTGTAG GGGCAACTAT TGGTAGCGCT 
GCAGATGCAT TCGGTGCCGA GATTGTTCTT AAAGTACGCG CACCTGAAAC AGTAGAACTA 
AAACAAATTA AATCCGGTGC GGTGCTGCTT GGCATGCTCG ATCCATTTGA TAGCGACATG 
ATTGCAGCCA TGGCTGCACA AGGTGTTACA GCCTTCTCTC TAGAAGCTGC GCCTCGCACA 
ACTCGCGCAC AAAGCATGGA TGTTTTGTCT TCTCAGGCAA ATATTGCGGG ATACAAAGCA 
GTGTTAGTTG CAGCAAACGA ATATCAACGC TTCATGCCAA TGCTGATGAC AGCTGCTGGT 
ACCGTTAAAG CGGCTCGCAT ACTCATCTTG GGCGCTGGTG TAGCTGGCTT ACAAGCCATT 
GCTACTGCAA AACGTCTTGG TGCTGTAATT GAAGCGTCCG ATGTTCGCCC CGCTGCAAAA 
GAACAAATTG AATCCTTGGG TGCCAAGTTT GTTGATGTCC CATATGAGAC TGATGAAGAG 
CGTGAGATCG CTCAAGGTGT TGGCGGATAT GCTCGTCCTA TGCCTGAAGC TTGGATGAAG 
CGCCAAGCCG CCTTGGTTGC AGAGCGTGCC CAACAAGCTG ACATCGTAAT CACTACAGCA 
TTGATTCCGG GACGTAAACC ACCAGTTCTA TTGCATAGCG ATACTGTCGC TAATATGAAG 
CCAGGATCGA TCGTGATCGA CTTAGCTGCA GGTAAGGGTG ATAACGGTTC GGGTAACTGC 
CCTTTAACTC AGGCGGATAA AGTGATTGAT GTAAACGGTG TGAAGATTGT GGGCTATACC 
AATTTAGCCA GTATGGTTGC GGCAGATGCT TCTGCACTCT ACTCACGTAA CTTACTCGAC 
TTTATGAAAC TCATTGTGGA TAAAGACGCA AATTTGGTTA TCCCAAGTGA TGATGACATC 
GTTACCGCCT GCTTAATGTG TCGTGATGGC CAAGCCATCC GCAAAAACTA A
 
Protein sequence
MRIGVPLETR PGETRVAATP ETVKKLIGQG HTVVIQKDAG VKASQPDSAY EAVGATIGSA 
ADAFGAEIVL KVRAPETVEL KQIKSGAVLL GMLDPFDSDM IAAMAAQGVT AFSLEAAPRT 
TRAQSMDVLS SQANIAGYKA VLVAANEYQR FMPMLMTAAG TVKAARILIL GAGVAGLQAI 
ATAKRLGAVI EASDVRPAAK EQIESLGAKF VDVPYETDEE REIAQGVGGY ARPMPEAWMK 
RQAALVAERA QQADIVITTA LIPGRKPPVL LHSDTVANMK PGSIVIDLAA GKGDNGSGNC 
PLTQADKVID VNGVKIVGYT NLASMVAADA SALYSRNLLD FMKLIVDKDA NLVIPSDDDI 
VTACLMCRDG QAIRKN