| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1790 |
|---|
| Symbol | |
|---|
| ID | 5052294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 1868168 |
|---|
| End bp | 1868494 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640471963 |
|---|
| Product | preprotein translocase, YajC subunit |
|---|
| Protein accession | YP_001156567 |
|---|
| Protein GI | 145589970 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1862] Preprotein translocase subunit YajC |
|---|
| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.645433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTA GTAACGCTTT TGCCCAGGCT CCAGCCGGGG GTGTTGATAC TGGTGGCTTA
ATGAGCTTCC TTCCTTTGAT TTTGATGTTT GCAGTGTTGT ACTTCATCAT GATTCGCCCA
CAAATGAAGC GTCAAAAAGA AACTAAAGCC ATGCTTGAAG CATTAGCAGT TGGTGATGAA
GTAGTGACTG TTGGGGGCAT CCTCGGCAAA GTAAGCGCTT TAAAAGACCA AGTGGTTACA
GTAGAAATCT CTGCCGGCAC TGAAGTGCAA CTTCAAAAAG GCGCCATTAC TACCGTTCTG
CCAAAAGGCA CCCTGAAGTC TGCTTAA
|
|---|
| Protein sequence | MWISNAFAQA PAGGVDTGGL MSFLPLILMF AVLYFIMIRP QMKRQKETKA MLEALAVGDE
VVTVGGILGK VSALKDQVVT VEISAGTEVQ LQKGAITTVL PKGTLKSA
|
|---|
| |