| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1789 |
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| Symbol | |
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| ID | 5053611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1866852 |
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| End bp | 1868033 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471962 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001156566 |
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| Protein GI | 145589969 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.320337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGACTC GAGAATATAA AGCCATGACC AAACCCGTTC ACTTTAATAT TTTGGCGCGC
GACTCCCAGA GCCCCGCCCG CCTTGGTCAG TTAGACCTTC CTCATGGCAG TGTGCAGACG
CCGATCTTCA TGCCAGTTGG TACTTATGGC ACAGTCAAAG CAATGACGCC CCGTGATCTC
AATGAAGCTA AGGCGCAAAT TATTTTAGGC AATACCTTTC ATCTTTGGTT ACGCCCTGGT
TTAGATGTCA TTAAAAAACA TGGTGGCCTC CATCGCTTCA TGGGCTGGGA CAAACCCATC
CTGACAGACT CGGGTGGTTT TCAAGTATTT AGTTTGGGTG CCCTTAGAAA AATTTCAGAA
GAGGGGGTGA CATTTGCATC CCCCATTAAT GGCGACAAAC TTTTTATGTC GCCAGAAGTC
TCTATGGAAA TTCAGGCAGT CTTAAATAGT GACATTGCAA TGCAATTTGA TGAATGCACA
CCTTATGAAA CTAAGGGGCA GGCCACTTCA GAAAAAACAG CACGTGCTTC TTTGGAAATG
TCTTTGCGTT GGGGTGATCG CTCATTAAAA CGTTTTCGAG AGCTGAATAC TGGAAACGGA
CTCTTTGGAA TTGTGCAAGG TGGCATGTTT GAACATTTAC GAGAATTTTC GTTAGATGCC
GTCAGCCAAC AAGGTTTTGA TGGGATTGCT ATTGGGGGTT TATCGGTTGG CGAGCCAAAA
CCGGAGTTTG AGCGAATTTT GAATTTCACC GCCCCTAAAT TGCCAGAACA TATGCCCCAC
TATCTCATGG GGGTAGGCAC TCCAGAAGAC CTGATTCTGG GGGTAAGCCT TGGAATTGAT
ATGTTTGACT GCGTCATGCC GACACGAAAT GCCCGCAATG GCTGGCTATT TACTCGCTTT
GGCGACCTAA AACTGCGTAA CTCAGGCTAC AAGGATGATG ATCGGCCTGT TGACCCTACT
TGTGCTTGCT ATACCTGTCA AAACTTCACC AGATCGTATC TAAATCACCT TCAGAAGGCA
AATGAGATCC TGGGCTCCCA GCTCAATACC ATCCATAACC TCTCTTACTA TCTGCAACTC
ATGACAGAGG TTCGAGAGGC TTTAAGCAAG GACCGTTTCA GTGCTTATCG GGAAGAATTC
AAAGCCAACC GCCAGCGCGG GGTAGAGCCG GGACAGGATT AA
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| Protein sequence | MSTREYKAMT KPVHFNILAR DSQSPARLGQ LDLPHGSVQT PIFMPVGTYG TVKAMTPRDL
NEAKAQIILG NTFHLWLRPG LDVIKKHGGL HRFMGWDKPI LTDSGGFQVF SLGALRKISE
EGVTFASPIN GDKLFMSPEV SMEIQAVLNS DIAMQFDECT PYETKGQATS EKTARASLEM
SLRWGDRSLK RFRELNTGNG LFGIVQGGMF EHLREFSLDA VSQQGFDGIA IGGLSVGEPK
PEFERILNFT APKLPEHMPH YLMGVGTPED LILGVSLGID MFDCVMPTRN ARNGWLFTRF
GDLKLRNSGY KDDDRPVDPT CACYTCQNFT RSYLNHLQKA NEILGSQLNT IHNLSYYLQL
MTEVREALSK DRFSAYREEF KANRQRGVEP GQD
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