Gene Pnuc_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1788 
SymbolqueA 
ID5052060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1865833 
End bp1866879 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content44% 
IMG OID640471961 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001156565 
Protein GI145589968 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCT CTGACTTTAA TTACGAACTC CCGCCCGAGC TAATCGCCCA GCATCCTTTG 
GCAAATAGAA CCGATAGCCG CCTTTTAGAG GTCAGGGCTG ACGGGATGAA TCACGCCCAT
TTGGTAGATC GCCAGTTTAA GGACATTCTT ATCCTTGCTC AGCCTGGGGA CTTATTAGTC
TTTAATGACA CCAAGGTCAT ACCAGCCCGC TTACATGGCA AAAAGGAGAC CGGTGGTAAT
GTCGAGCTAC TCATCGAACG AATCAGCGGT GAAAAACAGG CTTGGGTACA AATTAGAGCC
TCTAAGGTAC CAAAGACTGG GAGTACTGTG CATATTTACA ATCAGTCCGG CGAAACTTTC
TCGGTCGAAA TGATTGGCTA TGACGGTCGA TTTTATGAAG TTCTCTTTCC CGATCATGTT
TTTTCCTTAC TTGAGCGTTT TGGCAAGCTA CCTTTACCTC CTTACATAGA GCATCAACCT
GATGGCGAAG ATGCGCAGCG CTATCAAACG GTAGTCGCTA AAAATCCAGG GGCAGTTGCA
GCCCCAACTG CAGGCTTACA TTTTGATGAA GTCATTTTGC AAAAGCTCAA AGATGTAGGC
GTCAATCAAG CAACAGTCAC CCTTCATGTT GGTGCTGGAA CATTTACACC CGTGCGAGAA
GAAGATCTTT CAAAACACCA AATGCACTAT GAGTGGTTCT CCATTCCGAA AGAAACTTTA
CAAGCAATTG AGAAAACCAA GAAGAATGGT GGCAGAATAA TCGCTGTTGG TACAACTAGC
CTGAGAGCTT TAGAGAGCCA GGCGAATAGT CAGCAAAGCA GCGGGGAAAC TAATCTCTTT
ATCACTCCGG GATATCAATT TAAAGTAGTA GATTGTTTAT TAACAAACTT TCATCTACCA
AAATCCACCC TATTAATGTT GGTCAGTGCT TTTGCAGGAG TAGACAACAT TCGCTCTGCC
TATCAACATG CTATTAATCA ACAATATCGC TTCTTCAGTT ATGGGGATGC GATGTTCCTT
TGTCGACTCG AGAATATAAA GCCATGA
 
Protein sequence
MQLSDFNYEL PPELIAQHPL ANRTDSRLLE VRADGMNHAH LVDRQFKDIL ILAQPGDLLV 
FNDTKVIPAR LHGKKETGGN VELLIERISG EKQAWVQIRA SKVPKTGSTV HIYNQSGETF
SVEMIGYDGR FYEVLFPDHV FSLLERFGKL PLPPYIEHQP DGEDAQRYQT VVAKNPGAVA
APTAGLHFDE VILQKLKDVG VNQATVTLHV GAGTFTPVRE EDLSKHQMHY EWFSIPKETL
QAIEKTKKNG GRIIAVGTTS LRALESQANS QQSSGETNLF ITPGYQFKVV DCLLTNFHLP
KSTLLMLVSA FAGVDNIRSA YQHAINQQYR FFSYGDAMFL CRLENIKP