Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1786 |
Symbol | |
ID | 5052881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1862860 |
End bp | 1863723 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640471959 |
Product | 4-hydroxybenzoate polyprenyl transferase |
Protein accession | YP_001156563 |
Protein GI | 145589966 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTGA AAGAACGCTT CACTTCTTAC GCTTATTTAA TTCGCCTAGA TAAGCCTATT GGCACTTTAT TACTGTTATG GCCTACCTTG TGGGCTCTAT GGCTTGCAAG TTCAGGTACG CCCAGCCTTC AAATGCTGAT GATATTTATT GCTGGTACTT TTTTGATGCG AAGTGCTGGC TGCGCCATCA ATGATTATGC GGATCGTGAT TTTGACCGCC ATGTTCAGAG AACAAAACAC CGACCAGTGA CTAGTGGAAA GATTTCTGGA AAAGAGGCAG TTGTTGTTGC TGGTGTTCTG GCGTTGATAG CCTTTTTACT GATTCAACCA TTAAACATTT TTACAAAGGA ACTATCAGTA CTTGCTTTAC TAGTCGCCTT TATCTATCCC TTTACAAAGC GATTTTTGGC GATACCTCAG GCGGTGCTTG GAATTGCTTT TGGTTTTGGT ATTCCAATGG CCTATGCAGC CGTTCTAGAC TTTATTCCTC TTGAAGCTTG GGTTTTATTT GTCGGAAATA TTTTTTGGGC CATTGCCTAT GACACCGCCT ATGCAATGGT CGATCGAGAT GATGATTTAC GGCTTGGCCT TCGCACTTCA GCCATAACTT TTGGATCATA TGAAGTGTTA GCTATTGCAT TTAGCTATGG GGTTTTATTT GTGAGTCAAT TATGGGTGGC TCACTTGGCA AGCTTGAGTA ATTATTTTTT AATTGGGTGG GGCGCAGCTC TGGGGTGTGC CATTTATCAA CTCAAACTAG TTTCTAGTAG AAAACGGGAG GATTGCTTCC TGGCTTTTCG TCACAATAAC TGGTTAGGCG GATTCTTATT TCTAGGAATC GTTTTAGGTC TTAGTATTCA ATAA
|
Protein sequence | MSLKERFTSY AYLIRLDKPI GTLLLLWPTL WALWLASSGT PSLQMLMIFI AGTFLMRSAG CAINDYADRD FDRHVQRTKH RPVTSGKISG KEAVVVAGVL ALIAFLLIQP LNIFTKELSV LALLVAFIYP FTKRFLAIPQ AVLGIAFGFG IPMAYAAVLD FIPLEAWVLF VGNIFWAIAY DTAYAMVDRD DDLRLGLRTS AITFGSYEVL AIAFSYGVLF VSQLWVAHLA SLSNYFLIGW GAALGCAIYQ LKLVSSRKRE DCFLAFRHNN WLGGFLFLGI VLGLSIQ
|
| |