Gene Pnuc_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1786 
Symbol 
ID5052881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1862860 
End bp1863723 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID640471959 
Product4-hydroxybenzoate polyprenyl transferase 
Protein accessionYP_001156563 
Protein GI145589966 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTGA AAGAACGCTT CACTTCTTAC GCTTATTTAA TTCGCCTAGA TAAGCCTATT 
GGCACTTTAT TACTGTTATG GCCTACCTTG TGGGCTCTAT GGCTTGCAAG TTCAGGTACG
CCCAGCCTTC AAATGCTGAT GATATTTATT GCTGGTACTT TTTTGATGCG AAGTGCTGGC
TGCGCCATCA ATGATTATGC GGATCGTGAT TTTGACCGCC ATGTTCAGAG AACAAAACAC
CGACCAGTGA CTAGTGGAAA GATTTCTGGA AAAGAGGCAG TTGTTGTTGC TGGTGTTCTG
GCGTTGATAG CCTTTTTACT GATTCAACCA TTAAACATTT TTACAAAGGA ACTATCAGTA
CTTGCTTTAC TAGTCGCCTT TATCTATCCC TTTACAAAGC GATTTTTGGC GATACCTCAG
GCGGTGCTTG GAATTGCTTT TGGTTTTGGT ATTCCAATGG CCTATGCAGC CGTTCTAGAC
TTTATTCCTC TTGAAGCTTG GGTTTTATTT GTCGGAAATA TTTTTTGGGC CATTGCCTAT
GACACCGCCT ATGCAATGGT CGATCGAGAT GATGATTTAC GGCTTGGCCT TCGCACTTCA
GCCATAACTT TTGGATCATA TGAAGTGTTA GCTATTGCAT TTAGCTATGG GGTTTTATTT
GTGAGTCAAT TATGGGTGGC TCACTTGGCA AGCTTGAGTA ATTATTTTTT AATTGGGTGG
GGCGCAGCTC TGGGGTGTGC CATTTATCAA CTCAAACTAG TTTCTAGTAG AAAACGGGAG
GATTGCTTCC TGGCTTTTCG TCACAATAAC TGGTTAGGCG GATTCTTATT TCTAGGAATC
GTTTTAGGTC TTAGTATTCA ATAA
 
Protein sequence
MSLKERFTSY AYLIRLDKPI GTLLLLWPTL WALWLASSGT PSLQMLMIFI AGTFLMRSAG 
CAINDYADRD FDRHVQRTKH RPVTSGKISG KEAVVVAGVL ALIAFLLIQP LNIFTKELSV
LALLVAFIYP FTKRFLAIPQ AVLGIAFGFG IPMAYAAVLD FIPLEAWVLF VGNIFWAIAY
DTAYAMVDRD DDLRLGLRTS AITFGSYEVL AIAFSYGVLF VSQLWVAHLA SLSNYFLIGW
GAALGCAIYQ LKLVSSRKRE DCFLAFRHNN WLGGFLFLGI VLGLSIQ