| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1784 |
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| Symbol | |
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| ID | 5051998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1861245 |
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| End bp | 1861970 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471957 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001156561 |
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| Protein GI | 145589964 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAAA TCGCCATGAA TCTGGTGCAA GTTCAAGAAC GAATTGAACT TGCCGTATTA
GCAGCAAAAC GCGAACCCGA AGAAGTAGAG TTATTAGCTG TTAGCAAAAC TTTTCCTGCA
GCAGCAGTTG AAGAGGCAAT GCATGCTGGG CAATCTGCCT TTGGCGAAAA TTATGTCCAG
GAAGCGGTTG AGAAAATTCT CAAGCTCTCA AAATTACGCC CTTGGTTAAC GTGGCACTTT
ATTGGCCCCC TACAAAGCAA TAAAACGAGA GAGGTTGCCG AACATTTTGA TTGGGTTCAT
AGCGTAGACC GTCTCAAAAT TGCTGAACGT CTATCTACTC AGCGTGGTGA GTTTTCTGAA
TTGGCACCAT TGCAATTGTG TGTACAGGTC AATGTCAGCG AGGAGGAAAG CAAAAGCGGA
ATTGCTCTCA CCGAAGCCGA AACACTATGC AATGCAATCT CTCAATTACC CCACGTTGTT
CTGCGAGGCC TGATGGCCAT TCCAGCGCCG ACTGATAATC CCGCGGCTCA ACGAGAGGCC
TTCGCCACAG TTCGCGCTTG CTTTGAACGC ATTCGCGATA CCCATACGAT AGAACCTGGA
TTTCAATTTT TTGACACCCT ATCTATGGGT ATGTCTGATG ATTTAGAGGC GGCAATAGCG
GAAGGCAGCA CCATGGTTCG TGTTGGAACT GCTATTTTTG GGAAGCGCGA TAAGATTACA
GTATGA
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| Protein sequence | MNQIAMNLVQ VQERIELAVL AAKREPEEVE LLAVSKTFPA AAVEEAMHAG QSAFGENYVQ
EAVEKILKLS KLRPWLTWHF IGPLQSNKTR EVAEHFDWVH SVDRLKIAER LSTQRGEFSE
LAPLQLCVQV NVSEEESKSG IALTEAETLC NAISQLPHVV LRGLMAIPAP TDNPAAQREA
FATVRACFER IRDTHTIEPG FQFFDTLSMG MSDDLEAAIA EGSTMVRVGT AIFGKRDKIT
V
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