Gene Pnuc_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1781 
Symbol 
ID5052598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1857309 
End bp1858814 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content48% 
IMG OID640471954 
ProductD-lactate dehydrogenase (cytochrome) 
Protein accessionYP_001156558 
Protein GI145589961 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTA TGAATATGGT GACCCCGCCC CCCGATATAG CCGCTATTAG CGCACTTCAG 
TCCAAATTAG TCTCCGCTTT GCGACCGATA CTTCCTGAGC ACGCCCTACT TTGGGAGCCA
GAAGACACAA TCCCTTATGA ATGTGATGGT TTGGCGGCCT ATAGACGCAT GCCTTTGGCA
GTTGCCCTCC CTGAAACTGA AGCTCAAGTC ACTCAAATCC TGAAGATTTG CTTTGACATG
AATATTCCAG TGGTGCCTCG AGGTTCTGGC ACCGGACTAT CGGGTGGTGC GATGCCCATA
TCCCAAGGCC TAGTTTTGTC ACTAGCCAAG CTCAAGAAAA TTCTCAGTAT TGATCCATTT
ACAAGAACAG CTGTTGTACA ACCAGGCGTT CGCAATCTTG CCATTTCGGA AGCAGTAGGT
CATTTGGGTT TGTACTACGC ACCAGATCCG TCATCACAAA TTGCCTGCTC TATTGGTGGC
AATGTGAATG AAAACTCAGG CGGTGTTCAT TGCCTGAAAT ATGGACTTAC CTTGCACAAT
GTCTTGCGTG TTCGTGGAGT ACTCATGAAT GGCGAGATTG TTGAGTTTGG CAGTCTTGCA
CCTGACTCTC CTGGATTAGA TTTGCTAGCC ATCATGATGG GTAGTGAAGG TATGTTGGCT
GTGGTGACTG AAGTTACAGT CAAGCTCGTT GCCAAACCAA AACTCGCACG CGTCATTATG
GCCAGCTTTG ATGACATTGA AAAAGGTGGC AATGCTGTCG CCGCCATTAT TGCCGCAGGC
ATTATTCCTG CCGGTTTAGA GATGATGGAT AAGGCCACTA CTCGTGCCGT GGAAGAGTTT
GTGCATGCAG GTTATGACTT AGATGCTGCT GCAATTTTGC TTTGTGAATC CGATGGCACT
CCAGAAGAAG TGGCAGAAGA AATTGAGCGC ATGACTAAGG TATTAGAGGA AGCTGGCGCC
AGCGGTATCC AGATTTCTCA GAATGAATCT GAGCGACTCA AATTTTGGAG TGGGCGTAAA
AATGCATTTC CAGCAGCAGG TCGTTTAGCG CCAGATTACT ACTGCATGGA TGGCACAATT
CCACGTCGCC ATATCGCGAC CCTGCTAAAG CGTATCCAAG GTATGGAAAC AAAATATGGC
CTAGGCTGCT TAAATGTATT TCATGCCGGC GATGGCAATA TGCATCCACT CATTTTATTT
AATGGTTCAG ACCAGGAAGA GTGGCATCGT GCAGAGGAAT TTGGCACTGA AATCTTAGAA
GCTTGTGTTG AGTTAGGCGG AACCATCACT GGAGAGCATG GTGTAGGCAT CGAAAAAATT
AACTCCATGT GTGTGCAATT TGGTGAGGGT GAACGTGAAT CCTTTTGGGG AGTGAAAAGC
GCTTTTGATC CAGGGCATCT ATTGAATCCT GATAAGGCGA TCCCAACCTT AAGTCGTTGC
GCCGAATATG GCCGCATGCG CATCAGCGGC GGCAAATTAC CTCATCCAGA ATTGGAGCGC
TTCTAA
 
Protein sequence
MIVMNMVTPP PDIAAISALQ SKLVSALRPI LPEHALLWEP EDTIPYECDG LAAYRRMPLA 
VALPETEAQV TQILKICFDM NIPVVPRGSG TGLSGGAMPI SQGLVLSLAK LKKILSIDPF
TRTAVVQPGV RNLAISEAVG HLGLYYAPDP SSQIACSIGG NVNENSGGVH CLKYGLTLHN
VLRVRGVLMN GEIVEFGSLA PDSPGLDLLA IMMGSEGMLA VVTEVTVKLV AKPKLARVIM
ASFDDIEKGG NAVAAIIAAG IIPAGLEMMD KATTRAVEEF VHAGYDLDAA AILLCESDGT
PEEVAEEIER MTKVLEEAGA SGIQISQNES ERLKFWSGRK NAFPAAGRLA PDYYCMDGTI
PRRHIATLLK RIQGMETKYG LGCLNVFHAG DGNMHPLILF NGSDQEEWHR AEEFGTEILE
ACVELGGTIT GEHGVGIEKI NSMCVQFGEG ERESFWGVKS AFDPGHLLNP DKAIPTLSRC
AEYGRMRISG GKLPHPELER F