Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1781 |
Symbol | |
ID | 5052598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1857309 |
End bp | 1858814 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640471954 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_001156558 |
Protein GI | 145589961 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTTA TGAATATGGT GACCCCGCCC CCCGATATAG CCGCTATTAG CGCACTTCAG TCCAAATTAG TCTCCGCTTT GCGACCGATA CTTCCTGAGC ACGCCCTACT TTGGGAGCCA GAAGACACAA TCCCTTATGA ATGTGATGGT TTGGCGGCCT ATAGACGCAT GCCTTTGGCA GTTGCCCTCC CTGAAACTGA AGCTCAAGTC ACTCAAATCC TGAAGATTTG CTTTGACATG AATATTCCAG TGGTGCCTCG AGGTTCTGGC ACCGGACTAT CGGGTGGTGC GATGCCCATA TCCCAAGGCC TAGTTTTGTC ACTAGCCAAG CTCAAGAAAA TTCTCAGTAT TGATCCATTT ACAAGAACAG CTGTTGTACA ACCAGGCGTT CGCAATCTTG CCATTTCGGA AGCAGTAGGT CATTTGGGTT TGTACTACGC ACCAGATCCG TCATCACAAA TTGCCTGCTC TATTGGTGGC AATGTGAATG AAAACTCAGG CGGTGTTCAT TGCCTGAAAT ATGGACTTAC CTTGCACAAT GTCTTGCGTG TTCGTGGAGT ACTCATGAAT GGCGAGATTG TTGAGTTTGG CAGTCTTGCA CCTGACTCTC CTGGATTAGA TTTGCTAGCC ATCATGATGG GTAGTGAAGG TATGTTGGCT GTGGTGACTG AAGTTACAGT CAAGCTCGTT GCCAAACCAA AACTCGCACG CGTCATTATG GCCAGCTTTG ATGACATTGA AAAAGGTGGC AATGCTGTCG CCGCCATTAT TGCCGCAGGC ATTATTCCTG CCGGTTTAGA GATGATGGAT AAGGCCACTA CTCGTGCCGT GGAAGAGTTT GTGCATGCAG GTTATGACTT AGATGCTGCT GCAATTTTGC TTTGTGAATC CGATGGCACT CCAGAAGAAG TGGCAGAAGA AATTGAGCGC ATGACTAAGG TATTAGAGGA AGCTGGCGCC AGCGGTATCC AGATTTCTCA GAATGAATCT GAGCGACTCA AATTTTGGAG TGGGCGTAAA AATGCATTTC CAGCAGCAGG TCGTTTAGCG CCAGATTACT ACTGCATGGA TGGCACAATT CCACGTCGCC ATATCGCGAC CCTGCTAAAG CGTATCCAAG GTATGGAAAC AAAATATGGC CTAGGCTGCT TAAATGTATT TCATGCCGGC GATGGCAATA TGCATCCACT CATTTTATTT AATGGTTCAG ACCAGGAAGA GTGGCATCGT GCAGAGGAAT TTGGCACTGA AATCTTAGAA GCTTGTGTTG AGTTAGGCGG AACCATCACT GGAGAGCATG GTGTAGGCAT CGAAAAAATT AACTCCATGT GTGTGCAATT TGGTGAGGGT GAACGTGAAT CCTTTTGGGG AGTGAAAAGC GCTTTTGATC CAGGGCATCT ATTGAATCCT GATAAGGCGA TCCCAACCTT AAGTCGTTGC GCCGAATATG GCCGCATGCG CATCAGCGGC GGCAAATTAC CTCATCCAGA ATTGGAGCGC TTCTAA
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Protein sequence | MIVMNMVTPP PDIAAISALQ SKLVSALRPI LPEHALLWEP EDTIPYECDG LAAYRRMPLA VALPETEAQV TQILKICFDM NIPVVPRGSG TGLSGGAMPI SQGLVLSLAK LKKILSIDPF TRTAVVQPGV RNLAISEAVG HLGLYYAPDP SSQIACSIGG NVNENSGGVH CLKYGLTLHN VLRVRGVLMN GEIVEFGSLA PDSPGLDLLA IMMGSEGMLA VVTEVTVKLV AKPKLARVIM ASFDDIEKGG NAVAAIIAAG IIPAGLEMMD KATTRAVEEF VHAGYDLDAA AILLCESDGT PEEVAEEIER MTKVLEEAGA SGIQISQNES ERLKFWSGRK NAFPAAGRLA PDYYCMDGTI PRRHIATLLK RIQGMETKYG LGCLNVFHAG DGNMHPLILF NGSDQEEWHR AEEFGTEILE ACVELGGTIT GEHGVGIEKI NSMCVQFGEG ERESFWGVKS AFDPGHLLNP DKAIPTLSRC AEYGRMRISG GKLPHPELER F
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