Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1778 |
Symbol | |
ID | 5052073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1854043 |
End bp | 1855533 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640471951 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_001156555 |
Protein GI | 145589958 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCAC CCGAAGCACT ATTTCCAGCC AATTGGACAA AAACCAAAAA GCAGGCAGAC TTAATAAAAT TAGCCAAATC CATCTTGCTT GAGCCTACCG GTCTATCCGA GCAAGATTTA CACCACACCT TTGGCCATAT GTTTTCTCAT CGCCTTGATG ATGCAGATTT ATATTTTCAG CACACTCGCA GCGAAAGTTG GAGCCTAGAA GAGGGCATCG TTAAATCAGG TAGTTTTAAT ATTGATCAAG GAGTCGGTGT TAGAGCTATT TATGGCGATA AAACCGCCTT TGCTTACTCC GATGAAATCA ACTTAGAAGC ACTAAGCAAG GCCGCAAAAG CTACGCGCGT TATTGGCCCA GAAGGCGGTA AGCAAGCAGT GGCGAGTAAG TTATTTAATC CTCTATCCAA TAAGCTCTAC TCTGATATCA ACCCTCTAGA CTCCTTGCAA CCTAAAGAAA AAATTGCTCT ACTCGAGAGT ATTGAGCGTC GAGCAAAAGC ACGTGACCCT CGCATCATTC AAGTCATGGC AAGTCTTGCC GGAGAATTTG ATGTCGTTTT AGTGGCAAGA GCTGATGGTC TTCTTGCTGC AGATATTCGC CCACTGGTGC GCGTTTCGGT ACATGTGATT GCCGAGCAAA ATGGTCGGCG TGAATCTGGC TCATCTGGTG GCGGAGCTCG TCATGACTAT CTTTACTTTG ATGCTGAACT CATTAATCGT TATGTAGATG AAGCAGTAGA TGGTGCCTTA GTCAATCTAG AGTCGCGCCC CGCACCCGCT GGACCAATGA CTGTTGTCAT GGGTCCAGGC TGGCCAGGTG TTCTATTGCA TGAAGCGGTT GGGCATGGCC TTGAAGGCGA TTTCAATCGC AAAGGCTCCT CCGCCTTTGC CGGTCGAATC GGGCAACGGG TGGCTGCCAA AGGGGTCACT GTAGTTGATG ACGGCACACT CTCGGGACGC AGGGGCTCAC TCAATATTGA TGATGAGGGA ACACCCACCC AATGCACAAC CTTGATTGAG GATGGCATCC TCAAAGGCTA CATTCAAGAC AGCTTAAATG CACGCTTGAT GAATATGCCC TTAACTGGAA ATGGGCGTCG TGAAAGTTTT GCCTCCCTAC CAATGCCCCG CATGACCAAT ACGTACATGC TGGCAGGCAA AGATGATCCC CAGGAAATTG TAGCCAGCAT CAAACGCGGC CTTTATGCCG TCAATTTCGG TGGTGGTCAA GTGGATATCA CCAGCGGCAA ATTTGTCTTT TCAGCATCCG AAGCCTATTG GGTCGAAAAT GGAAAAATCC AATACCCCGT TAAAGGTGCA ACCATTATTG GAAGTGGTCC GGAGTCCCTA AAACAGGTTT CTATGATCGG AAATGACCTT AAATTAGACG GTGGCGTTGG GGTTTGTGGC AAAGAAGGGC AAAGCGTCCC TGTCGGCGTT GGTCAGCCTA CTTTACGGAT TGATAGCCTG ACAGTCGGGG GTACCGCCTG A
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Protein sequence | MNAPEALFPA NWTKTKKQAD LIKLAKSILL EPTGLSEQDL HHTFGHMFSH RLDDADLYFQ HTRSESWSLE EGIVKSGSFN IDQGVGVRAI YGDKTAFAYS DEINLEALSK AAKATRVIGP EGGKQAVASK LFNPLSNKLY SDINPLDSLQ PKEKIALLES IERRAKARDP RIIQVMASLA GEFDVVLVAR ADGLLAADIR PLVRVSVHVI AEQNGRRESG SSGGGARHDY LYFDAELINR YVDEAVDGAL VNLESRPAPA GPMTVVMGPG WPGVLLHEAV GHGLEGDFNR KGSSAFAGRI GQRVAAKGVT VVDDGTLSGR RGSLNIDDEG TPTQCTTLIE DGILKGYIQD SLNARLMNMP LTGNGRRESF ASLPMPRMTN TYMLAGKDDP QEIVASIKRG LYAVNFGGGQ VDITSGKFVF SASEAYWVEN GKIQYPVKGA TIIGSGPESL KQVSMIGNDL KLDGGVGVCG KEGQSVPVGV GQPTLRIDSL TVGGTA
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