| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1772 |
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| Symbol | hrcA |
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| ID | 5052243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1842493 |
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| End bp | 1843503 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471945 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001156549 |
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| Protein GI | 145589952 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGAAC GTTCCCGCGC CCTACTAAAA ACCCTCATCG AGCGCTATAT CGAAGAGGGA
CAGCCTATTG GCTCGCGCAC ATTGTCCAGA TTTTCAGGTT TAGACCTCTC AGCGGCCACC
ATTCGCAATG TCATGGCTGA TCTAGAGGAT ATGGGTCTAG TAACAAGTCC ACACACCTCA
GCAGGCCGTA TTCCCACTCC TCGGGGCTAT CGTTTGTTTG TCGACACCAT GGTGACGGTT
CGCCCTTTGG AAGAAATGGC AGCTCGCGAG GTTGAAAAAG GTCTTTTGCC GGACTCTCCG
CAGCGTGTTT TGAATTCAGC CGCCCAGATT TTGTCGAACC TCACTCATTT TGCTGGTGTT
GTGATGACCC CCAAGCGTGC GCAAGTGTTT AAACATATTG AATTTTTGCG TCTAGGCGAA
GGCAAGATTT TGCTCATTAT GGTTACCCCA GAGGGTGATG TTCAAAATCG CATCCTTCCT
ACTACTCAGG ATTACACGCC TAGTCAGCTG ATAGAGGCCG GCAATTTTAT TAATACTCAG
TTTGCTGGTA AAAGTTTTGA GCAAGTACGT TTACACCTCA AATCCGATTT AGATAATTTA
CGTGCAGATA TTTCTGGCCT CATGGCATTA GCCCTGCAGA GCGGTGTAGC GGATTACGAC
ATGGGGCGTG GTGATATGGT GCTCTCTGGA GAACGTCGCT TATTAAACGT AGGTGATTTA
AGTTCTAATT TAGATAAGCT GCGCAAAATG TTTGACATGT TGGAGCAAAA GTCAGTCCTG
ATGCAATTGC TAGACGTATC AAGTCATGCG GATGGAATTC AGATTTTTAT TGGCGGCGAG
AGTGACTTAT TGCCTTATGA GGATTTGGCT GTCATCAGCG CCCCATATAG CGTCGATGGC
CAGATAGTCG GAACGCTGGG AGTGATTGGT CCTACTAGGA TGGCCTACGA TCGCGTTATT
CCGATTGTTG ATATCACTTC CAAATTGTTG TCTGGCGTTT TGAGTTCTTA A
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| Protein sequence | MDERSRALLK TLIERYIEEG QPIGSRTLSR FSGLDLSAAT IRNVMADLED MGLVTSPHTS
AGRIPTPRGY RLFVDTMVTV RPLEEMAARE VEKGLLPDSP QRVLNSAAQI LSNLTHFAGV
VMTPKRAQVF KHIEFLRLGE GKILLIMVTP EGDVQNRILP TTQDYTPSQL IEAGNFINTQ
FAGKSFEQVR LHLKSDLDNL RADISGLMAL ALQSGVADYD MGRGDMVLSG ERRLLNVGDL
SSNLDKLRKM FDMLEQKSVL MQLLDVSSHA DGIQIFIGGE SDLLPYEDLA VISAPYSVDG
QIVGTLGVIG PTRMAYDRVI PIVDITSKLL SGVLSS
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