Gene Pnuc_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1762 
Symbol 
ID5052013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1832126 
End bp1833115 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content44% 
IMG OID640471935 
Producthypothetical protein 
Protein accessionYP_001156539 
Protein GI145589942 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAA TTTTTACCCC TTTTCTTGCT GCTTTCATCC TAGCTTATAT CCTAAGGCCC 
GCTTTTCTTT GGCTTGAGAG GCGTCGGGTG CCTTCTCCGC TGGCTGCTGG CCTCAGTATC 
ATTTTTGGCC TAGGCATCGT GGGCGCGATA TTGAGCCTGT TTATTGGTCT ACTCAAAACT 
GAAGTACCCA TGATCAAAGA GCAGTTGCCA ACCTGGATTG CGAACACTCA AGCATGGTTA 
GGACCTAAAT TGGCCGACCT TCATATCAAC ATGGATTGGG GTCATCTCAA AACTCTTGCC 
TCTCAAAAAA TATCTGAACA CATTAGTGAG AACGCAGATG AGTTGATGAG TACCACTCTG 
GATACGGTCC TCATGTCTGG AAGTTCTGTC ATTACTGGAT TTGTAAATGC TGTACTAATT 
TTATTTGTGA TGTTTTACCT GCTAATTGAT TGGGCCCAGT TCTTTCAGTA CATCAAAAAT 
TTAGTACCGC CTCGCGCCCA AGAGACAATT CACCATCTAG CAATGCATAC CGATGGACTA 
CTTTCTCAGT ATCTCAATGG GATGGTGATT GTTATCTCTA TCATGTCTGC GTTTTATAGT 
ATTGGCCTGA GCCTCATCGG ACTCAAAGGT GCAGTTGCAC TGGGCATCTT CACGGCACTC 
ATGATTGTGA TTCCCTACAT TGGCATCACT ATTGGGTTTA CTCTAGCGAT CATCTCTGCC 
TTACTTCAAT TTGGACCGCA AAAAGAATTG GTTGCTGTGA TGGGCTTGTA TGGACTAGGC 
CAATTCCTGG AAGGCTTCAT CCTTACACCC CGCTTGGTGG GCGAGCGTAT TGGCCTGCAT 
CCTGTAGTCG TTTTATTTGC CTTGTTGCTC TTTGGAAAAC TCTTTGGATT TTTTGGAGTA 
CTACTAGCTT TGCCGATTAG TGCAGTGAGC TTAGTAATGG TTCAATATCT TTGGTCGGTT 
TACACACAAA GCAATTGGTA TAAAAAATAA
 
Protein sequence
MAEIFTPFLA AFILAYILRP AFLWLERRRV PSPLAAGLSI IFGLGIVGAI LSLFIGLLKT 
EVPMIKEQLP TWIANTQAWL GPKLADLHIN MDWGHLKTLA SQKISEHISE NADELMSTTL 
DTVLMSGSSV ITGFVNAVLI LFVMFYLLID WAQFFQYIKN LVPPRAQETI HHLAMHTDGL 
LSQYLNGMVI VISIMSAFYS IGLSLIGLKG AVALGIFTAL MIVIPYIGIT IGFTLAIISA 
LLQFGPQKEL VAVMGLYGLG QFLEGFILTP RLVGERIGLH PVVVLFALLL FGKLFGFFGV 
LLALPISAVS LVMVQYLWSV YTQSNWYKK