Gene Pnuc_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1759 
Symbol 
ID5052083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1829292 
End bp1829933 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID640471932 
Producthypothetical protein 
Protein accessionYP_001156536 
Protein GI145589939 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.335415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGATA CCCTTTTGCA ATTAAGTGAT TTACTGCTGC ACATTGACCG ACATTTGGAT 
GTGGTCATTC AGCAATATGG TCCTTGGGCC TATGGCTTGT TATTTGCCAT TGTTTTTGCA 
GAAACTGGTT TAGTCGTTGC TCCATTCTTG CCTGGTGATT CCTTATTGTT TATTGCGGGC 
GCTTATTGCG CTACTGAGCA TTTCAATATG TGGACGCTTT GCATTGGCCT ACTCATCGCA 
GCTGTGATGG GCAATACAGT GAATTATTTC ATCGGGCGTT GGATTGGAAA GAGAGTGTTT 
AGCAGTAAGT CACGCTGGAT CGATCAGGGC GCCTTATTGA AGACCCATGC GTTTTATGAA 
AAACATGGCG GCAAGACTAT CGTCTTGGCA CGCTTTTTGC CAATTATTCG CACCTTTGCA 
CCATTCATTG CGGGCGTGTC TGAAATGAAT TTTTCACGCT TTCAGTTGTT CAATATTACT 
GGTGCGGCTT TATGGGTATT TAGCTTAGTC GTTGCCGGAT ATTTCTTTGG CAACATTCCC 
ATCATTCGTC AAAACCTCAA CGTGATTGTT TTGATTGGTG TGGGTGCAGC AGCTTTGCCA 
GTGATTCTCG CTGCTGTATA TAAAATTTTC CGACGCAAGT AA
 
Protein sequence
MIDTLLQLSD LLLHIDRHLD VVIQQYGPWA YGLLFAIVFA ETGLVVAPFL PGDSLLFIAG 
AYCATEHFNM WTLCIGLLIA AVMGNTVNYF IGRWIGKRVF SSKSRWIDQG ALLKTHAFYE 
KHGGKTIVLA RFLPIIRTFA PFIAGVSEMN FSRFQLFNIT GAALWVFSLV VAGYFFGNIP 
IIRQNLNVIV LIGVGAAALP VILAAVYKIF RRK