Gene Pnuc_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1758 
Symbol 
ID5051952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1828411 
End bp1829253 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content46% 
IMG OID640471931 
Producthypothetical protein 
Protein accessionYP_001156535 
Protein GI145589938 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.542914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAC AACAACTCGA CTACTTCACC TCCCTCGTCA CTGAAGATGA ACACTTCCCT 
TTAACGGAAG CTGCCATCGC AGTAGCGCAA CACGCTTATC CGGATTTGGA TGTGCAGGGC 
ATATTGGATC ACTTAGATGA GCTTGGCAAC AAACTGAAAT TGCGTGTGAC GCCTGAAACT 
TCACCTATTC AGCGCTTACA AATTCTGAAG CATTTCTTTT ATAACGAGTT AGGCTTTGGT 
CCTAACCCAA ATGATTTTTA TGCGCCCGAG AATTCTTATC TACATCAGGT TATAGAAAAC 
CGTAGAGGTG TGCCAATTTC ATTAGCCATT CTGATGATGG AGTTAGGCCA ACAAATTGGT 
TTAAAAATTC GTGGTGTTTC ATTCCCGAAT CACTTCATGA TGCGCATTTC TTTGCAACAG 
GGCGAAGTGA TCATGGATCC ATTAACTGGC GAATCTCTCT CTAAGCATGA GCTACAAGAA 
ATGCTCGACC CCTACCTAGA TGCTAAAGGG TATCGAGGTG AGCTCAGTCT TCCCTTAAAC 
GTTTTCTTGC GAGCCTCTAG CCCTCGAGAG ATACTGTCGC GTTTCCTAAG AAACCTCAAA 
ATGATCTATT CCGAGCATGA GCGTTGGGAA CGTCTGCTGG GAATTCAGGA GCGGATGGTA 
ATTTTGCTCC CCGACTCGAT TGAAGAAGTA CGTGATCGTG GACTCATCTT TGCACAGCTT 
GAATACCTCC GTCCCGCATT AGCAGATATG CATCGCTATT TGAGCGAAGC TCCTGGAGCG 
GAAGATGCTA ACGATATTCG CGAGCACATT GCCACTCTAG AGAGTCAAAC TAAACTTCAC 
TAG
 
Protein sequence
MPTQQLDYFT SLVTEDEHFP LTEAAIAVAQ HAYPDLDVQG ILDHLDELGN KLKLRVTPET 
SPIQRLQILK HFFYNELGFG PNPNDFYAPE NSYLHQVIEN RRGVPISLAI LMMELGQQIG 
LKIRGVSFPN HFMMRISLQQ GEVIMDPLTG ESLSKHELQE MLDPYLDAKG YRGELSLPLN 
VFLRASSPRE ILSRFLRNLK MIYSEHERWE RLLGIQERMV ILLPDSIEEV RDRGLIFAQL 
EYLRPALADM HRYLSEAPGA EDANDIREHI ATLESQTKLH