Gene Pnuc_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1750 
Symbol 
ID5051994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1822519 
End bp1822722 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content43% 
IMG OID640471923 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001156527 
Protein GI145589930 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0957427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCG GAATTGTTAA GTGGTTCAAT GATGCAAAAG GTTTTGGCTT TATCAAACCT 
GATGATGGTG AAGAAGAGTT GTTCGCGCAT TTCAGCGCAA TTACTATGCC TGGGTTCAAA
ACCCTCAAGG AAAACCAAAA GGTAACGTTT GATATTACCC AAGGCCCTAA AGGCAAGCAA
GCTACCAATA TCCAAGCGGC TTAA
 
Protein sequence
MATGIVKWFN DAKGFGFIKP DDGEEELFAH FSAITMPGFK TLKENQKVTF DITQGPKGKQ 
ATNIQAA