Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1750 |
Symbol | |
ID | 5051994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1822519 |
End bp | 1822722 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640471923 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001156527 |
Protein GI | 145589930 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0957427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACCG GAATTGTTAA GTGGTTCAAT GATGCAAAAG GTTTTGGCTT TATCAAACCT GATGATGGTG AAGAAGAGTT GTTCGCGCAT TTCAGCGCAA TTACTATGCC TGGGTTCAAA ACCCTCAAGG AAAACCAAAA GGTAACGTTT GATATTACCC AAGGCCCTAA AGGCAAGCAA GCTACCAATA TCCAAGCGGC TTAA
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Protein sequence | MATGIVKWFN DAKGFGFIKP DDGEEELFAH FSAITMPGFK TLKENQKVTF DITQGPKGKQ ATNIQAA
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