Gene Pnuc_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1745 
Symbol 
ID5052809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1816354 
End bp1817592 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content43% 
IMG OID640471918 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001156522 
Protein GI145589925 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCTA AAAAATTAAC AAACTTTATC CTTGGGGCAA TGCTCTTAGG GATTGTTAGT 
GGTTATCTTG TTCATGTGTA CGGGTCAGCT TCGGGATTCG CCGCAAACTA TGTGGAATAT
ATTTCTGTAT TAACGGATAT CTTCTTAAGA TTAATCAAGA TGATTATTGC CCCCTTAGTC
TTTAGTACTC TAGTGGTTGG CATTGCAAGA ATGGGTGATG CCTCGGCTAT AGGGCGTGTG
GGTCTAAAGA CCTTTGCTTG GTTTATTGGT ATGTCCTTGG TGTCCATCTT ATTGGGCCTA
TTGATGGTCA ATCTTTTGCA TCCTGGCATT GGTGTGAATT TGCCTATTCC AGAGGTGACG
GCGAATACTG GCTTAGATAA GAGCGGGTTT AACGTGCGTG AGTTTTTCAA GCACATCTTC
CCAAGCAGTA TTTTTGATGC CATGGGCAAA AATGAAATAT TACAAATAGT CGTTTTTGCT
ATATTTTTTG GCGTTGCTGC GGGTAGCTTT GGGCAAAGGG CTGAGGAATT TATTCGCAAT
CTAGATATGC TCTCCCATAT CATGCTCAAG ATTACAAATG CCGTCATGAA GTTTGCGCCA
TTTGCAGTCT TTGCAGCAGT CTCCTCTGTG GTTGCTGAAA ATGGCCTGGC TATTTTGATG
ACCTATGGAA AGTTTATGGC CAGTTTTTAT GGGTCGATTT TGATATTGTG GCTAGTGATT
GTTTTAATTA GCTCCATTGT TCTCAAAAGA AGAGCATTCC ATCTGGTTTC CATGTTGCGC
CAACCGATTT TGTTGGCCTT TAGTACGGCT AGCTCCGAAG CCGCTTATCC CATGACTCTT
GAGCAGGTAG AAAAGTTCGG TTGCAAAAAT AAGATAGCCT CTTTTGTTCT GCCGATTGGA
TACTCATTTA ATCTTGATGG CTCCATGATG TACTGCTCAT TTGCTGCGGT GTTTATTGCT
CAGGTATATT CAATTGACAT GACGCTTTCT CAGCAGCTCC TGATGTTGCT GGTGTTGATG
ATCACATCAA AAGGAATTGC TGGAGTTCCC CGTGCTTCCT TGGTGGTGAT TGCTGCGACT
CTTTCCCAAT TTAACTTGCC AGAAGCGGGC GTTTTATTAA TTTTAGGGGT AGATCATTTC
TTGGATATGG CACGCTCTGC CACTAATGTT TTAGGAAATG GCTTAGCGAC AGCAGTCATT
TCAAAGTGGG AGGGGGAGCT TGACCCACAT GGCTCTTAA
 
Protein sequence
MTSKKLTNFI LGAMLLGIVS GYLVHVYGSA SGFAANYVEY ISVLTDIFLR LIKMIIAPLV 
FSTLVVGIAR MGDASAIGRV GLKTFAWFIG MSLVSILLGL LMVNLLHPGI GVNLPIPEVT
ANTGLDKSGF NVREFFKHIF PSSIFDAMGK NEILQIVVFA IFFGVAAGSF GQRAEEFIRN
LDMLSHIMLK ITNAVMKFAP FAVFAAVSSV VAENGLAILM TYGKFMASFY GSILILWLVI
VLISSIVLKR RAFHLVSMLR QPILLAFSTA SSEAAYPMTL EQVEKFGCKN KIASFVLPIG
YSFNLDGSMM YCSFAAVFIA QVYSIDMTLS QQLLMLLVLM ITSKGIAGVP RASLVVIAAT
LSQFNLPEAG VLLILGVDHF LDMARSATNV LGNGLATAVI SKWEGELDPH GS