Gene Pnuc_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1740 
SymbolileS 
ID5053625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1810689 
End bp1813550 
Gene Length2862 bp 
Protein Length953 aa 
Translation table11 
GC content46% 
IMG OID640471913 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001156517 
Protein GI145589920 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA AAGAAAATAC TTACCCCGTC AATTTACTAG ATAGTTCATT TCCAATGCGG 
GGAGATTTGG CCAAGCGCGA ACCCCAATGG GTAGCTCAGT GGCAAAAAAA TAAACTGTAT
GAAAAGATTC GTGCTGCCCA TGCCAATCAA CCAAAGTTCA TTCTGCATGA TGGCCCTCCT
TATGCCAACG GTGATATTCA TATTGGTCAT GCGGTAAATA AAATTCTGAA GGACATGATT
GTCAAATCTC GTTGGTTAAT GGGCTTTGAC TCTGCTTATG TTCCAGGCTG GGATTGTCAC
GGAATGCCAA TTGAGATTCA GATTGAAAAA CAATTTGGTA AAAATTTGCC TACTGCCGAA
GTGCAAGCTA AGGCACGTGC TTATGCCCAA GTACAGATTG ATAAACAGAA AAAAGATTTT
GAGCGTTTGG GGGTGTTGGG TGACTGGAAT AACCCTTACT TGACCATGAA CTTTCGCAAT
GAAGCCGATG AAATTCGGGC GCTAGGGAAA ATCTGGGAAA AGGGTTACGT CTTCCGCGGC
CTAAAACCAG TTAACTGGTG TTTTGATTGC GGCTCAGCTC TGGCTGAGGC TGAAGTGGAG
TATCAAGATA AAACTGACCC TACCGTTGAT GTCGGCTTTG CGTTTGATGA GGCGCAACGC
CCACAACTTG CAAAAGCATT TGGGCTGAGC GAACTACCGA ATAAGCCAGG TCAGATCGTT
ATTTGGACAA CTACACCTTG GACTATTCCG GCTAACCAAG CGATGAACGT CCATCCAGAA
TTAATTTATG CATTGGTCGA CGTTGGCGAC AAGTTATTGA TCCTGGCCAA AGACCGTGTT
GAAACTTGCT TGCAAGACTA TGGCCTCGAA GGAAAAATCA TTGCTACATG TACGGGTAGT
CAATTGGCTA ATATTTCTTT TTGGCACCCT TTGGCATCAT TACATGAGGG ATACAAAAGA
CTCTCGCCAA TCTATCCAGC CGAGTACGTC ACCATCGATA CCGGTACTGG CATTGTTCAC
TCCGCACCAG CTTATGGCGA GGAAGACTTT AAATCTTGTA AAGCCAACAA TCTTGCTGAT
AAAGATATTC TCAATCCAGT GATGGGTAAC GGCGTCTATG CATCATGGCT CCCGCTCTTT
GCCAATGAAT ACATTTGGAA GGCCAACCCA AAGATTGTTG AAGCAATGCG CGAAGCAGGC
AGCCTCTTAC GTGACAAGAC GTATACCCAC TCATACATGC ATTGCTGGCG TCATAAGTCA
CCCATCATCT ATCGTGCAAC CTCCCAGTGG TTCGCCAGTA TGGATAAAAA GCCAACAGAT
GGCAAAGCTA GCTTGCGAGA AACTGCATTA GCCGGAATTG AAAATACTGA GTTTTTCCCG
GCATGGGGTA AACAACGCTT ACACAGCATG ATTGCCAATC GTCCAGACTG GACTTTGTCC
CGTCAACGTC AATGGGGTGT GCCGATGGCT TTCTTTGTAC ACAAAGAAAC TGGTGATCCT
CATCCACGCA CAGTAGAACT TCTAGAAGAA ATTGCCAAGC GGGTAGAAAC CGGTGGCATT
GAAGCATGGC AACAATTGGA AGTTGCTGAA CTGCTTGGAG AAGAAGCATC TCAGTACGAA
AAAAATCGTG ACACTCTTGA TGTGTGGTTT GATTCAGGCA CAACGCATTG GCACGTGATT
CGCGGCTCGC ACCGTGATGA ATTACTAACG GCTGAAGCTG AAACGCCGCA AGGACGTTTA
GCCGACCTCT ACCTCGAAGG ATCAGATCAA CACCGTGGCT GGTTTCATTC ATCCCTCTTA
ACTGGCGCTA TGTTGGATGG TAAGCCTCCT TACAAAGCTC TGCTTACCCA TGGCTTTACC
GTTGACGGTC AAGGTCGCAA GATGAGTAAG TCTGTTGGTA ATGTGATCGC ACCCCAGCAA
GTTGCAGATA AATTAGGGGC AGAAATTATT CGCCTCTGGG TTGCATCCAC CGATTACTCT
GGTGAAATGA CAATTTCAGA TGAAATTCTC AAACGAGTTA CTGAGAGCTA TCGTCGCATT
CGTAATACCT TGCGTTTCTT ATTAGCCAAC CTTTCTGACT TTGATCATGC TAAGCATGCA
ATGCCTGTTG ATCAATGGCT TGAAATTGAC CGCTATGCAC TTGCCTTAGC AAATCAATTA
CAAGAGGACG TTGAGGCCCA TTACAAAGCT TATGAATTCC AGCCAGCAGT GGCACGCATG
CTCTCATTCT GCTCTGAAGA TTTAGGTGGC TTTTATTTAG ACATCATCAA GGATCGTCTT
TATACAAGCG CGCCTAATTC TCCTGATCGC CGAGCTGCAC AAAATGCGCT ATTTCACATT
ACTCGCAATC TCTTGAAGTG GTTATCCCCA TTCCTCTCTT TTACTGCTGA AGAGGCCTGG
AAGGACTTTC CACACGGTTC AGACAACCAA GCGTCGGAAT CTATCTTTAT GGAAGAATTT
GGTAGCTTCC CTGAAATTAC TGACTCGCAA GAACTACTTG CCAAATGGAA TCGTATTCGT
GAAATTCGCT CTGAAGTTAC TAAAGCAATT GAGGTAGAGC GTGAAGCTGG TAATGTGGGC
TCATCCCTAC AAGCTGAACT CACGATCAAA GTGGGTGATG TGGACTTTGC AATTCTTCAC
TCGCTAGAGA ATGATTTACG CTTTGTAACC ATTACCTCTA GCGCCTCTAT TGAACTGAGT
AATGCGGGCT TAGAAGTATT AGTGCGTGGT AGTCAATATA AGAAATGTGG GCGATGCTGG
CATCACACCC CAGACGTGGG CGCAAATTCA GACCACCCTG AGTTATGTGG GCGCTGTATT
AGCAATCTAT TTGGCGACGG CGATCATCGC TTATTTGCAT AA
 
Protein sequence
MSEKENTYPV NLLDSSFPMR GDLAKREPQW VAQWQKNKLY EKIRAAHANQ PKFILHDGPP 
YANGDIHIGH AVNKILKDMI VKSRWLMGFD SAYVPGWDCH GMPIEIQIEK QFGKNLPTAE
VQAKARAYAQ VQIDKQKKDF ERLGVLGDWN NPYLTMNFRN EADEIRALGK IWEKGYVFRG
LKPVNWCFDC GSALAEAEVE YQDKTDPTVD VGFAFDEAQR PQLAKAFGLS ELPNKPGQIV
IWTTTPWTIP ANQAMNVHPE LIYALVDVGD KLLILAKDRV ETCLQDYGLE GKIIATCTGS
QLANISFWHP LASLHEGYKR LSPIYPAEYV TIDTGTGIVH SAPAYGEEDF KSCKANNLAD
KDILNPVMGN GVYASWLPLF ANEYIWKANP KIVEAMREAG SLLRDKTYTH SYMHCWRHKS
PIIYRATSQW FASMDKKPTD GKASLRETAL AGIENTEFFP AWGKQRLHSM IANRPDWTLS
RQRQWGVPMA FFVHKETGDP HPRTVELLEE IAKRVETGGI EAWQQLEVAE LLGEEASQYE
KNRDTLDVWF DSGTTHWHVI RGSHRDELLT AEAETPQGRL ADLYLEGSDQ HRGWFHSSLL
TGAMLDGKPP YKALLTHGFT VDGQGRKMSK SVGNVIAPQQ VADKLGAEII RLWVASTDYS
GEMTISDEIL KRVTESYRRI RNTLRFLLAN LSDFDHAKHA MPVDQWLEID RYALALANQL
QEDVEAHYKA YEFQPAVARM LSFCSEDLGG FYLDIIKDRL YTSAPNSPDR RAAQNALFHI
TRNLLKWLSP FLSFTAEEAW KDFPHGSDNQ ASESIFMEEF GSFPEITDSQ ELLAKWNRIR
EIRSEVTKAI EVEREAGNVG SSLQAELTIK VGDVDFAILH SLENDLRFVT ITSSASIELS
NAGLEVLVRG SQYKKCGRCW HHTPDVGANS DHPELCGRCI SNLFGDGDHR LFA