Gene Pnuc_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1738 
Symbol 
ID5053097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1809077 
End bp1809706 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID640471911 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001156515 
Protein GI145589918 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAA TCGTTACCTT AATCTCAGGC CGCGGATCCA ACTTCGAGGC GATCGTTAAA 
ACTGCTCAAA AAGAGCAATG GCCCGTCAAA TTTGCTGGCG TGATTGCCAA CCACTCTGCG
GCCAAGGGGC TTGATTTTGC TCGCTCACAG GGCATTCCAG CCTATGTAAT CGAGCATAAA
GAGCATGCAA GCCGTGAGTC CTTCGATGCA GCCCTGATTG AGCAAATTGA TGCTCTAGGG
GCTGATTTGG TTGTTTTGGC GGGCTTTATG AGAATTTTGA CCCCCAGATT TATCCGTCAT
TTTGAGGGGC GTTTAATGAA TATTCATCCT GCCTTGCTTC CAGCCTTTCC AGGTTTACAT
ACCCACGAAC GTGCTTTAGA GGCTGGAGTG AAGGAGCACG GTGCTACGGT GCACTTTGTA
ACAGAAGGTG TCGATGAGGG CCCAATCATC TGTCAGGCCT GTGTACCAGT GCTTGATGGA
GATAGTGCCG ATACCTTGGC AGCTCGAGTT TTGGCTGCTG AGCATCAGAT TTACCCGCGG
GCCGTAAAAT GGTTCCTTGA TGGACGATTG CGAATAGAAG GTAATCAAGT GAAGTTACAA
CCCCCAGAGT CGCAATTTAT AAAATTATGA
 
Protein sequence
MLSIVTLISG RGSNFEAIVK TAQKEQWPVK FAGVIANHSA AKGLDFARSQ GIPAYVIEHK 
EHASRESFDA ALIEQIDALG ADLVVLAGFM RILTPRFIRH FEGRLMNIHP ALLPAFPGLH
THERALEAGV KEHGATVHFV TEGVDEGPII CQACVPVLDG DSADTLAARV LAAEHQIYPR
AVKWFLDGRL RIEGNQVKLQ PPESQFIKL